RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W SNZ2P53824 298 aa4.39□□□□□ -1.71
YDC1YPL087W MRPL19P53875 158 aa4.39□□□□□ -1.71
YDC1YPL087W NOP13P53883 403 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
YDC1YPL087W YNL146WP53906 100 aa4.39□□□□□ -1.71
YDC1YPL087W SCW10Q04951 389 aa4.39□□□□□ -1.71
YDC1YPL087W RQC1Q05468 723 aaKnown RBP4.39□□□□□ -1.71
YDC1YPL087W AYT1Q12226 474 aa4.39□□□□□ -1.71
YDC1YPL087W SNA3P14359 133 aa4.38□□□□□ -1.71
YDC1YPL087W PUT4P15380 627 aa4.38□□□□□ -1.71
YDC1YPL087W HEM15P16622 393 aa4.38□□□□□ -1.71
YDC1YPL087W MCK1P21965 375 aaKnown RBP4.38□□□□□ -1.71
YDC1YPL087W RAD14P28519 371 aa4.38□□□□□ -1.71
YDC1YPL087W SWC5P38326 303 aa4.38□□□□□ -1.71
YDC1YPL087W HSM3P38348 480 aa4.38□□□□□ -1.71
YDC1YPL087W NDE1P40215 560 aa4.38□□□□□ -1.71
YDC1YPL087W ESL1P40456 1118 aa4.38□□□□□ -1.71
YDC1YPL087W YJR054WP47114 497 aa4.38□□□□□ -1.71
YDC1YPL087W LIA1P47120 325 aaKnown RBP4.38□□□□□ -1.71
YDC1YPL087W MND1P53102 219 aa4.38□□□□□ -1.71
YDC1YPL087W RMD9P53140 646 aaKnown RBP4.38□□□□□ -1.71
YDC1YPL087W OGG1P53397 376 aaPredicted RBP4.38□□□□□ -1.71
YDC1YPL087W RCF2P53721 224 aa4.38□□□□□ -1.71
YDC1YPL087W ADA2Q02336 434 aa4.38□□□□□ -1.71
YDC1YPL087W KAP95Q06142 861 aaKnown RBP4.38□□□□□ -1.71
YDC1YPL087W ABP140Q08641 628 aaKnown RBP4.38□□□□□ -1.71
YDC1YPL087W YDR018CQ12185 396 aa4.38□□□□□ -1.71
YDC1YPL087W YDR524C-BQ3E6R4 66 aa4.38□□□□□ -1.71
YDC1YPL087W LAA1P39526 2014 aa4.38□□□□□ -1.71
YDC1YPL087W MOT1P32333 1867 aa4.37□□□□□ -1.71
YDC1YPL087W MES1P00958 751 aaKnown RBP4.37□□□□□ -1.71
YDC1YPL087W SLY1P22213 666 aa4.37□□□□□ -1.71
YDC1YPL087W TRX1P22217 103 aaKnown RBP4.37□□□□□ -1.71
YDC1YPL087W EFB1P32471 206 aaKnown RBP4.37□□□□□ -1.71
YDC1YPL087W PEX5P35056 612 aa4.37□□□□□ -1.71
YDC1YPL087W YHR054CP38780 354 aa4.37□□□□□ -1.71
YDC1YPL087W LIN1P38852 340 aaPredicted RBP4.37□□□□□ -1.71
YDC1YPL087W GWT1P47026 490 aa4.37□□□□□ -1.71
YDC1YPL087W SRB7P47822 140 aa4.37□□□□□ -1.71
YDC1YPL087W SLG1P54867 378 aa4.37□□□□□ -1.71
YDC1YPL087W SLT2Q00772 484 aa4.37□□□□□ -1.71
YDC1YPL087W RPC11Q04307 110 aaPredicted RBP4.37□□□□□ -1.71
YDC1YPL087W CMD1P06787 147 aaKnown RBP4.36□□□□□ -1.71
YDC1YPL087W SPS4P09937 338 aa4.36□□□□□ -1.71
YDC1YPL087W ASP3-2P0CX77 362 aa4.36□□□□□ -1.71
YDC1YPL087W ASP3-3P0CX78 362 aa4.36□□□□□ -1.71
YDC1YPL087W ASP3-4P0CX79 362 aa4.36□□□□□ -1.71
YDC1YPL087W ASP3-1P0CZ17 362 aa4.36□□□□□ -1.71
YDC1YPL087W GPA2P10823 449 aa4.36□□□□□ -1.71
YDC1YPL087W RRT12P25381 491 aa4.36□□□□□ -1.71
YDC1YPL087W PUT3P25502 979 aaPredicted RBP4.36□□□□□ -1.71
YDC1YPL087W MGT1P26188 188 aa4.36□□□□□ -1.71
YDC1YPL087W GPI10P30777 616 aa4.36□□□□□ -1.71
YDC1YPL087W SSE1P32589 693 aaKnown RBP4.36□□□□□ -1.71
YDC1YPL087W PMT1P33775 817 aa4.36□□□□□ -1.71
YDC1YPL087W COY1P34237 679 aa4.36□□□□□ -1.71
YDC1YPL087W SHE3P38272 425 aaKnown RBP4.36□□□□□ -1.71
YDC1YPL087W SCC4P40090 624 aa4.36□□□□□ -1.71
YDC1YPL087W FAU1P40099 211 aa4.36□□□□□ -1.71
YDC1YPL087W IDP2P41939 412 aa4.36□□□□□ -1.71
YDC1YPL087W YGL108CP53139 140 aa4.36□□□□□ -1.71
YDC1YPL087W VTA1Q06263 330 aa4.36□□□□□ -1.71
YDC1YPL087W YLL056CQ12177 298 aa4.36□□□□□ -1.71
YDC1YPL087W GPM3Q12326 303 aa4.36□□□□□ -1.71
YDC1YPL087W RRD2Q12461 358 aa4.36□□□□□ -1.71
YDC1YPL087W RRP36Q12481 300 aaPredicted RBP4.36□□□□□ -1.71
YDC1YPL087W BI3Q9ZZW7 517 aa4.36□□□□□ -1.71
YDC1YPL087W CDC31P06704 161 aaKnown RBP4.35□□□□□ -1.71
YDC1YPL087W IMA3P0CW40 589 aa4.35□□□□□ -1.71
YDC1YPL087W IMA4P0CW41 589 aa4.35□□□□□ -1.71
YDC1YPL087W BUB3P26449 341 aa4.35□□□□□ -1.71
YDC1YPL087W URA7P28274 579 aaKnown RBP4.35□□□□□ -1.71
YDC1YPL087W AFG1P32317 509 aa4.35□□□□□ -1.71
YDC1YPL087W MRP4P32902 394 aa4.35□□□□□ -1.71
YDC1YPL087W DBP7P36120 742 aaKnown RBP4.35□□□□□ -1.71
YDC1YPL087W HAT2P39984 401 aa4.35□□□□□ -1.71
YDC1YPL087W TMA22P47089 198 aaPredicted RBP4.35□□□□□ -1.71
YDC1YPL087W MNP1P53163 194 aaPredicted RBP4.35□□□□□ -1.71
YDC1YPL087W YGL039WP53183 348 aaKnown RBP4.35□□□□□ -1.71
YDC1YPL087W CAF40P53829 373 aa4.35□□□□□ -1.71
YDC1YPL087W YNL040WP53960 456 aaPredicted RBP4.35□□□□□ -1.71
YDC1YPL087W CWC21Q03375 135 aaKnown RBP4.35□□□□□ -1.71
YDC1YPL087W MZM1Q03429 123 aaPredicted RBP4.35□□□□□ -1.71
YDC1YPL087W TAF9Q05027 157 aa4.35□□□□□ -1.71
YDC1YPL087W SHS1Q07657 551 aa4.35□□□□□ -1.71
YDC1YPL087W IMA2Q08295 589 aa4.35□□□□□ -1.71
YDC1YPL087W SPE3Q12074 293 aaKnown RBP4.35□□□□□ -1.71
YDC1YPL087W ECM29P38737 1868 aa4.35□□□□□ -1.71
YDC1YPL087W SEN1Q00416 2231 aaKnown RBP4.34□□□□□ -1.71
YDC1YPL087W RED1P14291 827 aa4.34□□□□□ -1.71
YDC1YPL087W CBS2P14905 389 aa4.34□□□□□ -1.71
YDC1YPL087W CBF1P17106 351 aa4.34□□□□□ -1.71
YDC1YPL087W SPB1P25582 841 aaPredicted RBP4.34□□□□□ -1.71
YDC1YPL087W RPC19P28000 142 aaKnown RBP4.34□□□□□ -1.71
YDC1YPL087W FUN19P28003 413 aaPredicted RBP4.34□□□□□ -1.71
YDC1YPL087W MEI4P29467 408 aa4.34□□□□□ -1.71
YDC1YPL087W TPS2P31688 896 aaKnown RBP4.34□□□□□ -1.71
YDC1YPL087W RIM1P32445 135 aaKnown RBP4.34□□□□□ -1.71
YDC1YPL087W ATP11P32453 318 aa4.34□□□□□ -1.71
YDC1YPL087W CBF5P33322 483 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
YDC1YPL087W SWH1P35845 1188 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms