RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	MCK1	P21965	375 aa	Known RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	GSH1	P32477	678 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	MKK2	P32491	506 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	RPN2	P32565	945 aa	Known RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	MRPL6	P32904	214 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	YOR062C	P36025	268 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	PDS1	P40316	373 aa	Predicted RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	UTP25	P40498	721 aa	Known RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	CAK1	P43568	368 aa	Predicted RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	APS3	P47064	194 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	DCP2	P53550	970 aa	Known RBP	13.45	□□□□□ -0.26
SHR5	YOL110W	MTQ1	P53944	314 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	MMP1	Q12372	583 aa		13.45	□□□□□ -0.26
SHR5	YOL110W	IFA38	P38286	347 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	LEU5	P38702	357 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	YRB2	P40517	327 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	SNM1	P40993	198 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	BIT61	P47041	543 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	TPC1	P53257	314 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	GLE1	Q12315	538 aa		13.44	□□□□□ -0.26
SHR5	YOL110W	RPS21B	Q3E754	87 aa	Known RBP	13.44	□□□□□ -0.26
SHR5	YOL110W	HOM3	P10869	527 aa		13.43	□□□□□ -0.26
SHR5	YOL110W	STE4	P18851	423 aa		13.43	□□□□□ -0.26
SHR5	YOL110W	PTP2	P29461	750 aa		13.43	□□□□□ -0.26
SHR5	YOL110W	FAA1	P30624	700 aa	Known RBP	13.43	□□□□□ -0.26
SHR5	YOL110W	RCY1	P39531	840 aa		13.43	□□□□□ -0.26
SHR5	YOL110W	ARI1	P53111	347 aa	Known RBP	13.43	□□□□□ -0.26
SHR5	YOL110W	TPS1	Q00764	495 aa	Known RBP	13.43	□□□□□ -0.26
SHR5	YOL110W	YOL073C	Q08232	322 aa		13.43	□□□□□ -0.26
SHR5	YOL110W	CDC26	P14724	124 aa		13.42	□□□□□ -0.26
SHR5	YOL110W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	13.42	□□□□□ -0.26	not detected
SHR5	YOL110W	SAC1	P32368	623 aa	Known RBP	13.42	□□□□□ -0.26
SHR5	YOL110W	SSE2	P32590	693 aa	Known RBP	13.42	□□□□□ -0.26
SHR5	YOL110W	YJR141W	P47172	347 aa	Predicted RBP	13.42	□□□□□ -0.26
SHR5	YOL110W	SPT20	P50875	604 aa		13.42	□□□□□ -0.26
SHR5	YOL110W	PRM8	P53174	237 aa		13.42	□□□□□ -0.26
SHR5	YOL110W	NBA1	Q08229	501 aa	Known RBP	13.42	□□□□□ -0.26
SHR5	YOL110W	RIB3	Q99258	208 aa		13.42	□□□□□ -0.26
SHR5	YOL110W	CYR1	P08678	2026 aa	Known RBP	13.42	□□□□□ -0.26
SHR5	YOL110W	HO	P09932	586 aa		13.41	□□□□□ -0.26
SHR5	YOL110W	GPI12	P23797	304 aa		13.41	□□□□□ -0.26
SHR5	YOL110W	RPC82	P32349	654 aa		13.41	□□□□□ -0.26
SHR5	YOL110W	CYS4	P32582	507 aa	Known RBP	13.41	□□□□□ -0.26
SHR5	YOL110W	TOD6	P34219	525 aa		13.41	□□□□□ -0.26
SHR5	YOL110W	UBS1	P38290	277 aa		13.41	□□□□□ -0.26
SHR5	YOL110W	RIO2	P40160	425 aa	Known RBP	13.41	□□□□□ -0.26
SHR5	YOL110W	PMT3	P47190	753 aa		13.41	□□□□□ -0.26
SHR5	YOL110W	MOD5	P07884	428 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	GLK1	P17709	500 aa	Known RBP	13.4	□□□□□ -0.26
SHR5	YOL110W	YCK1	P23291	538 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	PMT2	P31382	759 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	LST4	P34239	828 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	SPC42	P36094	363 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	SPO73	P40031	143 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	NUP57	P48837	541 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	DAM1	P53267	343 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	YGR168C	P53293	376 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	CTL1	Q03220	320 aa	Known RBP	13.4	□□□□□ -0.26
SHR5	YOL110W	TRS23	Q03784	219 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	VID22	Q05934	901 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	VPS36	Q06696	566 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	YPL066W	Q12194	479 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	YOR214C	Q12282	236 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	YLR126C	Q12288	251 aa		13.4	□□□□□ -0.26
SHR5	YOL110W	YSF3	P0C074	85 aa	Predicted RBP	13.39	□□□□□ -0.27
SHR5	YOL110W	ASF2	P32448	525 aa	Predicted RBP	13.39	□□□□□ -0.27
SHR5	YOL110W	COG3	P40094	801 aa		13.39	□□□□□ -0.27
SHR5	YOL110W	YGR067C	P53243	804 aa		13.39	□□□□□ -0.27
SHR5	YOL110W	SWP1	Q02795	286 aa		13.39	□□□□□ -0.27
SHR5	YOL110W	RNH202	Q05635	350 aa		13.39	□□□□□ -0.27
SHR5	YOL110W	REX3	Q12090	404 aa		13.39	□□□□□ -0.27
SHR5	YOL110W	RPL17A	P05740	184 aa	Known RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	KSS1	P14681	368 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	RRP7	P25368	297 aa	Predicted RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	BCK2	P33306	851 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	EXO84	P38261	753 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	SIC1	P38634	284 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	MBP1	P39678	833 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	RPL17B	P46990	184 aa	Known RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	MPC1	P53157	130 aa	Known RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	SYF2	P53277	215 aa	Predicted RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	YMR210W	Q03649	449 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	NFI1	Q12216	726 aa		13.38	□□□□□ -0.27
SHR5	YOL110W	DBP10	Q12389	995 aa	Known RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	FAS1	P07149	2051 aa	Known RBP	13.38	□□□□□ -0.27
SHR5	YOL110W	COX1	P00401	534 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	RPL20A	P0CX23	172 aa	Known RBP	13.37	□□□□□ -0.27
SHR5	YOL110W	RPL20B	P0CX24	172 aa	Predicted RBP	13.37	□□□□□ -0.27
SHR5	YOL110W	RHB1	P25378	209 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	RIM101	P33400	625 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	ECM8	P38246	354 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	YBR285W	P38354	144 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	ECM34	P38728	170 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	PZF1	P39933	429 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	MPH1	P40562	993 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	EMC2	P47133	292 aa	Known RBP	13.37	□□□□□ -0.27
SHR5	YOL110W	YPL068C	Q02749	293 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	PSF1	Q12488	208 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	MHF1	Q3E835	90 aa		13.37	□□□□□ -0.27
SHR5	YOL110W	NAR1	P23503	491 aa	Known RBP	13.36	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms