RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	RPL20A	P0CX23	172 aa	Known RBP	4.07	□□□□□ -1.76
VPS71	YML041C	RPL20B	P0CX24	172 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS71	YML041C	IME2	P32581	645 aa		4.07	□□□□□ -1.76
VPS71	YML041C	MNS1	P32906	549 aa		4.07	□□□□□ -1.76
VPS71	YML041C	YUH1	P35127	236 aa		4.07	□□□□□ -1.76
VPS71	YML041C	YBR139W	P38109	508 aa		4.07	□□□□□ -1.76
VPS71	YML041C	MIX23	P38162	196 aa		4.07	□□□□□ -1.76
VPS71	YML041C	SWC5	P38326	303 aa		4.07	□□□□□ -1.76
VPS71	YML041C	PRP39	P39682	629 aa	Known RBP	4.07	□□□□□ -1.76
VPS71	YML041C	RPH1	P39956	796 aa		4.07	□□□□□ -1.76
VPS71	YML041C	YMR134W	P40207	237 aa		4.07	□□□□□ -1.76
VPS71	YML041C	AIM20	P40451	204 aa		4.07	□□□□□ -1.76
VPS71	YML041C	LYS12	P40495	371 aa	Known RBP	4.07	□□□□□ -1.76
VPS71	YML041C	LAM5	P43560	674 aa		4.07	□□□□□ -1.76
VPS71	YML041C	RRN9	P53437	365 aa		4.07	□□□□□ -1.76
VPS71	YML041C	HXT11	P54862	567 aa		4.07	□□□□□ -1.76
VPS71	YML041C	SPO19	Q03029	223 aa		4.07	□□□□□ -1.76
VPS71	YML041C	YMR181C	Q03231	154 aa		4.07	□□□□□ -1.76
VPS71	YML041C	CAB5	Q03941	241 aa		4.07	□□□□□ -1.76
VPS71	YML041C	APC4	Q04601	652 aa		4.07	□□□□□ -1.76
VPS71	YML041C	STE23	Q06010	1027 aa		4.07	□□□□□ -1.76
VPS71	YML041C	RRG8	Q06109	277 aa		4.07	□□□□□ -1.76
VPS71	YML041C	YDR262W	Q12331	272 aa		4.07	□□□□□ -1.76
VPS71	YML041C	YOR012W	Q12351	137 aa		4.07	□□□□□ -1.76
VPS71	YML041C	STE2	D6VTK4	431 aa		4.06	□□□□□ -1.76
VPS71	YML041C	ATP1	P07251	545 aa	Known RBP	4.06	□□□□□ -1.76
VPS71	YML041C	YLL053C	P0CD98	152 aa		4.06	□□□□□ -1.76
VPS71	YML041C	RNA1	P11745	407 aa	Known RBP	4.06	□□□□□ -1.76
VPS71	YML041C	CLN3	P13365	580 aa		4.06	□□□□□ -1.76
VPS71	YML041C	SAM2	P19358	384 aa	Known RBP	4.06	□□□□□ -1.76
VPS71	YML041C	MRPL8	P22353	238 aa		4.06	□□□□□ -1.76
VPS71	YML041C	PET100	P38958	111 aa		4.06	□□□□□ -1.76
VPS71	YML041C	LCP5	P40079	357 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS71	YML041C	ALF1	P53904	254 aa		4.06	□□□□□ -1.76
VPS71	YML041C	ECM18	Q04623	453 aa		4.06	□□□□□ -1.76
VPS71	YML041C	ERV41	Q04651	352 aa		4.06	□□□□□ -1.76
VPS71	YML041C	KAP95	Q06142	861 aa	Known RBP	4.06	□□□□□ -1.76
VPS71	YML041C	TPT1	Q12272	230 aa	Known RBP	4.06	□□□□□ -1.76
VPS71	YML041C	MRPL23	Q12487	163 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS71	YML041C	DCP1	Q12517	231 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS71	YML041C	RRP12	Q12754	1228 aa	Known RBP	4.06	□□□□□ -1.76
VPS71	YML041C	FSH3	Q99369	266 aa		4.06	□□□□□ -1.76
VPS71	YML041C	TPK3	P05986	398 aa		4.05	□□□□□ -1.76
VPS71	YML041C	MSS116	P15424	664 aa	Known RBP	4.05	□□□□□ -1.76
VPS71	YML041C	UGA1	P17649	471 aa		4.05	□□□□□ -1.76
VPS71	YML041C	MCK1	P21965	375 aa	Known RBP	4.05	□□□□□ -1.76
VPS71	YML041C	EMC2	P47133	292 aa	Known RBP	4.05	□□□□□ -1.76
VPS71	YML041C	NUP84	P52891	726 aa		4.05	□□□□□ -1.76
VPS71	YML041C	CAF40	P53829	373 aa		4.05	□□□□□ -1.76
VPS71	YML041C	VAC14	Q06708	880 aa		4.05	□□□□□ -1.76
VPS71	YML041C	RPS16A	P0CX51	143 aa	Known RBP	4.04	□□□□□ -1.76
VPS71	YML041C	RPS16B	P0CX52	143 aa	Known RBP	4.04	□□□□□ -1.76
VPS71	YML041C	DBR1	P24309	405 aa	Known RBP	4.04	□□□□□ -1.76
VPS71	YML041C	RTC2	P38279	296 aa		4.04	□□□□□ -1.76
VPS71	YML041C	SEC9	P40357	651 aa		4.04	□□□□□ -1.76
VPS71	YML041C	TOS3	P43637	560 aa		4.04	□□□□□ -1.76
VPS71	YML041C	SFH5	P47008	294 aa		4.04	□□□□□ -1.76
VPS71	YML041C	GTO1	P48239	356 aa		4.04	□□□□□ -1.76
VPS71	YML041C	YDL186W	P48568	277 aa		4.04	□□□□□ -1.76
VPS71	YML041C	AZR1	P50080	613 aa		4.04	□□□□□ -1.76
VPS71	YML041C	PNC1	P53184	216 aa	Known RBP	4.04	□□□□□ -1.76
VPS71	YML041C	YGR117C	P53270	476 aa		4.04	□□□□□ -1.76
VPS71	YML041C	TIM11	P81449	96 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS71	YML041C	MRPL35	Q06678	367 aa		4.04	□□□□□ -1.76
VPS71	YML041C	YPL199C	Q08954	240 aa		4.04	□□□□□ -1.76
VPS71	YML041C	AIM45	Q12480	344 aa	Known RBP	4.04	□□□□□ -1.76
VPS71	YML041C	SET6	Q12529	373 aa		4.04	□□□□□ -1.76
VPS71	YML041C	SSA3	P09435	649 aa	Known RBP	4.03	□□□□□ -1.76
VPS71	YML041C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VPS71	YML041C	KKQ8	P36004	724 aa		4.03	□□□□□ -1.76
VPS71	YML041C	RIB5	P38145	238 aa		4.03	□□□□□ -1.76
VPS71	YML041C	ABM1	P47146	123 aa		4.03	□□□□□ -1.76
VPS71	YML041C	RIB4	P50861	169 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS71	YML041C	LSC1	P53598	329 aa	Known RBP	4.03	□□□□□ -1.76
VPS71	YML041C	MPP6	P53725	186 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS71	YML041C	DBP6	P53734	629 aa	Known RBP	4.03	□□□□□ -1.76
VPS71	YML041C	ATC1	Q04005	294 aa		4.03	□□□□□ -1.76
VPS71	YML041C	AIM33	Q04516	312 aa		4.03	□□□□□ -1.76
VPS71	YML041C	RNH1	Q04740	348 aa		4.03	□□□□□ -1.76
VPS71	YML041C	BCH1	Q05029	724 aa		4.03	□□□□□ -1.76
VPS71	YML041C	ASA1	Q06822	443 aa		4.03	□□□□□ -1.76
VPS71	YML041C	SHS1	Q07657	551 aa		4.03	□□□□□ -1.76
VPS71	YML041C	RAX1	Q08760	435 aa		4.03	□□□□□ -1.76
VPS71	YML041C	THP3	Q12049	470 aa	Known RBP	4.03	□□□□□ -1.76
VPS71	YML041C	RUD3	Q12234	484 aa	Known RBP	4.03	□□□□□ -1.76
VPS71	YML041C	NCA2	Q12374	616 aa		4.03	□□□□□ -1.76
VPS71	YML041C	YOP1	Q12402	180 aa		4.03	□□□□□ -1.76
VPS71	YML041C	SPO24	Q3E752	67 aa		4.03	□□□□□ -1.76
VPS71	YML041C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	RIP-Chip
VPS71	YML041C	SSC1	P0CS90	654 aa	Known RBP	4.02	□□□□□ -1.77
VPS71	YML041C	SLY1	P22213	666 aa		4.02	□□□□□ -1.77
VPS71	YML041C	EXG1	P23776	448 aa	Known RBP	4.02	□□□□□ -1.77
VPS71	YML041C	SPS22	P25380	463 aa		4.02	□□□□□ -1.77
VPS71	YML041C	YPS1	P32329	569 aa		4.02	□□□□□ -1.77
VPS71	YML041C	RPC25	P35718	212 aa		4.02	□□□□□ -1.77
VPS71	YML041C	YKL070W	P36087	169 aa		4.02	□□□□□ -1.77
VPS71	YML041C	JLP2	P40206	208 aa		4.02	□□□□□ -1.77
VPS71	YML041C	UTP25	P40498	721 aa	Known RBP	4.02	□□□□□ -1.77
VPS71	YML041C	CDC40	P40968	455 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS71	YML041C	OST1	P41543	476 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms