RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W SKT5P34226 696 aa8.65□□□□□ -1.02
SFP1YLR403W NSG1P38837 291 aa8.65□□□□□ -1.02
SFP1YLR403W CRP1P38845 465 aaKnown RBP8.65□□□□□ -1.02
SFP1YLR403W FMP52P40008 231 aa8.65□□□□□ -1.02
SFP1YLR403W YMR147WP40218 223 aaKnown RBP8.65□□□□□ -1.02
SFP1YLR403W YGR201CP42936 225 aa8.65□□□□□ -1.02
SFP1YLR403W AIM23P47015 356 aa8.65□□□□□ -1.02
SFP1YLR403W ECM27P47144 725 aa8.65□□□□□ -1.02
SFP1YLR403W GUP1P53154 560 aa8.65□□□□□ -1.02
SFP1YLR403W GPI1P53306 609 aa8.65□□□□□ -1.02
SFP1YLR403W YNL181WP53878 407 aa8.65□□□□□ -1.02
SFP1YLR403W TIM44Q01852 431 aa8.65□□□□□ -1.02
SFP1YLR403W YAP6Q03935 383 aa8.65□□□□□ -1.02
SFP1YLR403W MSC3Q05812 728 aa8.65□□□□□ -1.02
SFP1YLR403W YLR224WQ05947 369 aa8.65□□□□□ -1.02
SFP1YLR403W MRX4Q12467 430 aa8.65□□□□□ -1.02
SFP1YLR403W RPL9AP05738 191 aaKnown RBP8.65□□□□□ -1.03
SFP1YLR403W CDC7P06243 507 aa8.65□□□□□ -1.03
SFP1YLR403W SAM1P10659 382 aaKnown RBP8.65□□□□□ -1.03
SFP1YLR403W UNG1P12887 359 aa8.65□□□□□ -1.03
SFP1YLR403W IMG2P25642 146 aaPredicted RBP8.65□□□□□ -1.03
SFP1YLR403W SSU1P41930 458 aa8.65□□□□□ -1.03
SFP1YLR403W BUD13P46947 266 aaPredicted RBP8.65□□□□□ -1.03
SFP1YLR403W MNN10P50108 393 aaKnown RBP8.65□□□□□ -1.03
SFP1YLR403W RPL9BP51401 191 aaKnown RBP8.65□□□□□ -1.03
SFP1YLR403W MRH4P53166 561 aa8.65□□□□□ -1.03
SFP1YLR403W YPL113CQ02961 396 aa8.65□□□□□ -1.03
SFP1YLR403W CTL1Q03220 320 aaKnown RBP8.65□□□□□ -1.03
SFP1YLR403W GAS2Q06135 555 aa8.65□□□□□ -1.03
SFP1YLR403W FRQ1Q06389 190 aa8.65□□□□□ -1.03
SFP1YLR403W TUM1Q08686 304 aaKnown RBP8.65□□□□□ -1.03
SFP1YLR403W RRG1Q12167 365 aaPredicted RBP8.65□□□□□ -1.03
SFP1YLR403W RPL24BP24000 155 aaKnown RBP8.64□□□□□ -1.03
SFP1YLR403W RPT3P33298 428 aaKnown RBP8.64□□□□□ -1.03
SFP1YLR403W ICS2P38284 255 aa8.64□□□□□ -1.03
SFP1YLR403W AIM46P38885 310 aa8.64□□□□□ -1.03
SFP1YLR403W AGP3P43548 558 aa8.64□□□□□ -1.03
SFP1YLR403W HLJ1P48353 224 aa8.64□□□□□ -1.03
SFP1YLR403W PKP2P53170 491 aa8.64□□□□□ -1.03
SFP1YLR403W SLM2P53955 656 aa8.64□□□□□ -1.03
SFP1YLR403W YPL014WQ02606 381 aa8.64□□□□□ -1.03
SFP1YLR403W PSR2Q07949 397 aa8.64□□□□□ -1.03
SFP1YLR403W YPL257WQ08974 193 aa8.64□□□□□ -1.03
SFP1YLR403W AAC1P04710 309 aa8.63□□□□□ -1.03
SFP1YLR403W SEC53P07283 254 aaKnown RBP8.63□□□□□ -1.03
SFP1YLR403W ARG8P18544 423 aa8.63□□□□□ -1.03
SFP1YLR403W SEC59P20048 519 aa8.63□□□□□ -1.03
SFP1YLR403W YOX1P34161 385 aa8.63□□□□□ -1.03
SFP1YLR403W TGL1P34163 548 aa8.63□□□□□ -1.03
SFP1YLR403W YBL086CP38177 466 aa8.63□□□□□ -1.03
SFP1YLR403W YGR117CP53270 476 aa8.63□□□□□ -1.03
SFP1YLR403W DIA1P54005 336 aa8.63□□□□□ -1.03
SFP1YLR403W VPS9P54787 451 aa8.63□□□□□ -1.03
SFP1YLR403W YMR209CQ03648 457 aa8.63□□□□□ -1.03
SFP1YLR403W YPR078CQ06813 372 aa8.63□□□□□ -1.03
SFP1YLR403W ENV7Q12003 364 aa8.63□□□□□ -1.03
SFP1YLR403W SUL2Q12325 893 aa8.63□□□□□ -1.03
SFP1YLR403W SEC12P11655 471 aa8.63□□□□□ -1.03
SFP1YLR403W COQ3P27680 312 aa8.63□□□□□ -1.03
SFP1YLR403W GND2P53319 492 aa8.63□□□□□ -1.03
SFP1YLR403W YAT1P80235 687 aa8.63□□□□□ -1.03
SFP1YLR403W YPL071CQ02864 156 aa8.63□□□□□ -1.03
SFP1YLR403W YDR124WQ04608 324 aa8.63□□□□□ -1.03
SFP1YLR403W NAT4Q04751 285 aa8.63□□□□□ -1.03
SFP1YLR403W SSK1Q07084 712 aa8.63□□□□□ -1.03
SFP1YLR403W PML1Q07930 204 aaPredicted RBP8.63□□□□□ -1.03
SFP1YLR403W HRT3Q12347 344 aa8.63□□□□□ -1.03
SFP1YLR403W YER152CP10356 443 aa8.62□□□□□ -1.03
SFP1YLR403W RPP1BP10622 106 aaKnown RBP8.62□□□□□ -1.03
SFP1YLR403W PDX1P16451 410 aa8.62□□□□□ -1.03
SFP1YLR403W ZRC1P20107 442 aa8.62□□□□□ -1.03
SFP1YLR403W BOS1P25385 244 aa8.62□□□□□ -1.03
SFP1YLR403W SRB6P32570 121 aa8.62□□□□□ -1.03
SFP1YLR403W AME1P38313 324 aa8.62□□□□□ -1.03
SFP1YLR403W YPR003CP53394 754 aa8.62□□□□□ -1.03
SFP1YLR403W TGL2P54857 326 aa8.62□□□□□ -1.03
SFP1YLR403W GTO3Q04806 366 aa8.62□□□□□ -1.03
SFP1YLR403W YLR053CQ12026 108 aa8.62□□□□□ -1.03
SFP1YLR403W PET20Q99373 253 aa8.62□□□□□ -1.03
SFP1YLR403W SRD1P09007 221 aa8.61□□□□□ -1.03
SFP1YLR403W GAP1P19145 602 aaPredicted RBP8.61□□□□□ -1.03
SFP1YLR403W HEM12P32347 362 aaPredicted RBP8.61□□□□□ -1.03
SFP1YLR403W HIS7P33734 552 aaKnown RBP8.61□□□□□ -1.03
SFP1YLR403W ALY1P36117 915 aa8.61□□□□□ -1.03
SFP1YLR403W RRN10P38204 145 aa8.61□□□□□ -1.03
SFP1YLR403W IKI1P38874 309 aa8.61□□□□□ -1.03
SFP1YLR403W KHA1P40309 873 aa8.61□□□□□ -1.03
SFP1YLR403W DUO1P53168 247 aaKnown RBP8.61□□□□□ -1.03
SFP1YLR403W CTF19Q02732 369 aa8.61□□□□□ -1.03
SFP1YLR403W EST2Q06163 884 aa8.61□□□□□ -1.03
SFP1YLR403W RAD34Q06665 692 aa8.61□□□□□ -1.03
SFP1YLR403W YPL199CQ08954 240 aa8.61□□□□□ -1.03
SFP1YLR403W YOR304C-AO14468 76 aa8.61□□□□□ -1.03
SFP1YLR403W HAP2P06774 265 aa8.61□□□□□ -1.03
SFP1YLR403W RPL31AP0C2H8 113 aaKnown RBP8.61□□□□□ -1.03
SFP1YLR403W RPL31BP0C2H9 113 aaKnown RBP8.61□□□□□ -1.03
SFP1YLR403W FUN14P18411 198 aa8.61□□□□□ -1.03
SFP1YLR403W RHB1P25378 209 aa8.61□□□□□ -1.03
SFP1YLR403W BDF1P35817 686 aa8.61□□□□□ -1.03
SFP1YLR403W VBA5P36172 582 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms