RNA–Protein interactions for RNA: YLR107W

REX3, Transcript of RNA exonuclease, yeast

Gene REX3, Length 1,215 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REX3	YLR107W	BNS1	P50084	137 aa		4.1	□□□□□ -1.75
REX3	YLR107W	PIS1	P06197	220 aa	Known RBP	4.09	□□□□□ -1.75
REX3	YLR107W	RPL1A	P0CX43	217 aa	Known RBP	4.09	□□□□□ -1.75
REX3	YLR107W	RPL1B	P0CX44	217 aa	Known RBP	4.09	□□□□□ -1.75
REX3	YLR107W	RPL12A	P0CX53	165 aa	Known RBP	4.09	□□□□□ -1.75
REX3	YLR107W	RPL12B	P0CX54	165 aa		4.09	□□□□□ -1.75
REX3	YLR107W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
REX3	YLR107W	AAT2	P23542	418 aa	Known RBP	4.09	□□□□□ -1.75
REX3	YLR107W	PRR1	P28708	518 aa		4.09	□□□□□ -1.75
REX3	YLR107W	UTH1	P36135	365 aa		4.09	□□□□□ -1.75
REX3	YLR107W	PAC11	P40960	533 aa		4.09	□□□□□ -1.75
REX3	YLR107W	HAC1	P41546	238 aa		4.09	□□□□□ -1.75
REX3	YLR107W	EGT2	P42835	1041 aa		4.09	□□□□□ -1.75
REX3	YLR107W	PMT5	P52867	743 aa		4.09	□□□□□ -1.75
REX3	YLR107W	SPR6	Q01684	191 aa		4.09	□□□□□ -1.75
REX3	YLR107W	YDR541C	Q03049	344 aa		4.09	□□□□□ -1.75
REX3	YLR107W	PRM6	Q04705	352 aa		4.09	□□□□□ -1.75
REX3	YLR107W	YCR024C-B	Q3E7Z8	88 aa		4.09	□□□□□ -1.75
REX3	YLR107W	OPI3	P05375	206 aa		4.08	□□□□□ -1.76
REX3	YLR107W	YSC83	P32792	385 aa		4.08	□□□□□ -1.76
REX3	YLR107W	ANR2	P36090	516 aa	Predicted RBP	4.08	□□□□□ -1.76
REX3	YLR107W	BAT1	P38891	393 aa	Known RBP	4.08	□□□□□ -1.76
REX3	YLR107W	EFM4	P40516	257 aa		4.08	□□□□□ -1.76
REX3	YLR107W	ATG18	P43601	500 aa		4.08	□□□□□ -1.76
REX3	YLR107W	URC2	Q04411	772 aa		4.08	□□□□□ -1.76
REX3	YLR107W	SLM5	P25345	492 aa	Known RBP	4.07	□□□□□ -1.76
REX3	YLR107W	PEX5	P35056	612 aa		4.07	□□□□□ -1.76
REX3	YLR107W	SPT10	P35208	640 aa		4.07	□□□□□ -1.76
REX3	YLR107W	OXA1	P39952	402 aa		4.07	□□□□□ -1.76
REX3	YLR107W	DFG10	P40526	253 aa		4.07	□□□□□ -1.76
REX3	YLR107W	YJL055W	P47044	245 aa		4.07	□□□□□ -1.76
REX3	YLR107W	CRH1	P53301	507 aa		4.07	□□□□□ -1.76
REX3	YLR107W	RRN9	P53437	365 aa		4.07	□□□□□ -1.76
REX3	YLR107W	ALF1	P53904	254 aa		4.07	□□□□□ -1.76
REX3	YLR107W	MEH1	Q02205	184 aa		4.07	□□□□□ -1.76
REX3	YLR107W	ECM7	Q06200	448 aa		4.07	□□□□□ -1.76
REX3	YLR107W	MFG1	Q07684	458 aa		4.07	□□□□□ -1.76
REX3	YLR107W	TOA2	P32774	122 aa		4.06	□□□□□ -1.76
REX3	YLR107W	MCR1	P36060	302 aa	Known RBP	4.06	□□□□□ -1.76
REX3	YLR107W	GPX2	P38143	162 aa		4.06	□□□□□ -1.76
REX3	YLR107W	ATM1	P40416	690 aa		4.06	□□□□□ -1.76
REX3	YLR107W	CLD1	P53264	445 aa		4.06	□□□□□ -1.76
REX3	YLR107W	NOP6	Q07623	225 aa	Known RBP	4.06	□□□□□ -1.76
REX3	YLR107W	YOP1	Q12402	180 aa		4.06	□□□□□ -1.76
REX3	YLR107W	TPK3	P05986	398 aa		4.05	□□□□□ -1.76
REX3	YLR107W	ARF1	P11076	181 aa	Known RBP	4.05	□□□□□ -1.76
REX3	YLR107W	BLI1	P35727	113 aa		4.05	□□□□□ -1.76
REX3	YLR107W	MRP21	P38175	177 aa		4.05	□□□□□ -1.76
REX3	YLR107W	MLH1	P38920	769 aa		4.05	□□□□□ -1.76
REX3	YLR107W	RTT102	P53330	157 aa		4.05	□□□□□ -1.76
REX3	YLR107W	YET2	Q04210	160 aa		4.05	□□□□□ -1.76
REX3	YLR107W	YDL114W	Q07530	308 aa		4.05	□□□□□ -1.76
REX3	YLR107W	PAR32	Q12515	295 aa	Known RBP	4.05	□□□□□ -1.76
REX3	YLR107W	RAD5	P32849	1169 aa	Predicted RBP	4.04	□□□□□ -1.76
REX3	YLR107W	DOA1	P36037	715 aa		4.04	□□□□□ -1.76
REX3	YLR107W	SXM1	Q04175	944 aa	Known RBP	4.04	□□□□□ -1.76
REX3	YLR107W	LIP2	Q06005	328 aa		4.04	□□□□□ -1.76
REX3	YLR107W	ASA1	Q06822	443 aa		4.04	□□□□□ -1.76
REX3	YLR107W	YPR091C	Q06833	770 aa		4.04	□□□□□ -1.76
REX3	YLR107W	MNE1	P24720	663 aa		4.03	□□□□□ -1.76
REX3	YLR107W	FUN26	P31381	517 aa		4.03	□□□□□ -1.76
REX3	YLR107W	OM14	P38325	134 aa		4.03	□□□□□ -1.76
REX3	YLR107W	YER186C	P40101	306 aa		4.03	□□□□□ -1.76
REX3	YLR107W	AAD15	Q08361	143 aa		4.03	□□□□□ -1.76
REX3	YLR107W	NAG1	Q8TGN9	163 aa		4.03	□□□□□ -1.76
REX3	YLR107W	PFF1	P38244	976 aa		4.02	□□□□□ -1.77
REX3	YLR107W	ASN2	P49090	572 aa	Known RBP	4.02	□□□□□ -1.77
REX3	YLR107W	IPK1	Q06667	281 aa		4.02	□□□□□ -1.77
REX3	YLR107W	HTZ1	Q12692	134 aa	Known RBP	4.02	□□□□□ -1.77
REX3	YLR107W	CDC50	P25656	391 aa		4.01	□□□□□ -1.77
REX3	YLR107W	TIR2	P33890	251 aa		4.01	□□□□□ -1.77
REX3	YLR107W	MNL1	P38888	796 aa		4.01	□□□□□ -1.77
REX3	YLR107W	ABM1	P47146	123 aa		4.01	□□□□□ -1.77
REX3	YLR107W	TRM112	P53738	135 aa	Predicted RBP	4.01	□□□□□ -1.77
REX3	YLR107W	SKI8	Q02793	397 aa	Predicted RBP	4.01	□□□□□ -1.77
REX3	YLR107W	LDS2	Q08218	356 aa		4.01	□□□□□ -1.77
REX3	YLR107W	FCY22	Q12119	530 aa		4.01	□□□□□ -1.77
REX3	YLR107W	RNA1	P11745	407 aa	Known RBP	4	□□□□□ -1.77
REX3	YLR107W	MDL1	P33310	695 aa		4	□□□□□ -1.77
REX3	YLR107W	GEP4	P38812	185 aa		4	□□□□□ -1.77
REX3	YLR107W	GDI1	P39958	451 aa	Known RBP	4	□□□□□ -1.77
REX3	YLR107W	YNL208W	P40159	199 aa	Known RBP	4	□□□□□ -1.77
REX3	YLR107W	ERO1	Q03103	563 aa		4	□□□□□ -1.77
REX3	YLR107W	SRN2	Q99176	213 aa		4	□□□□□ -1.77
REX3	YLR107W	RRP7	P25368	297 aa	Predicted RBP	3.99	□□□□□ -1.77
REX3	YLR107W	SWI3	P32591	825 aa		3.99	□□□□□ -1.77
REX3	YLR107W	KAP104	P38217	918 aa	Known RBP	3.99	□□□□□ -1.77
REX3	YLR107W	ALD5	P40047	520 aa	Known RBP	3.99	□□□□□ -1.77
REX3	YLR107W	DNL4	Q08387	944 aa	Predicted RBP	3.99	□□□□□ -1.77
REX3	YLR107W	YDL199C	Q12407	687 aa		3.99	□□□□□ -1.77
REX3	YLR107W	PCL9	Q12477	304 aa		3.99	□□□□□ -1.77
REX3	YLR107W	COX4	P04037	155 aa		3.98	□□□□□ -1.77
REX3	YLR107W	SPO23	P33757	523 aa		3.98	□□□□□ -1.77
REX3	YLR107W	YHR177W	P38867	453 aa		3.98	□□□□□ -1.77
REX3	YLR107W	SEC28	P40509	296 aa	Known RBP	3.98	□□□□□ -1.77
REX3	YLR107W	YIP5	P53108	310 aa		3.98	□□□□□ -1.77
REX3	YLR107W	MLC1	P53141	149 aa		3.98	□□□□□ -1.77
REX3	YLR107W	RCF1	Q03713	159 aa		3.98	□□□□□ -1.77
REX3	YLR107W	MEX67	Q99257	599 aa	Known RBP	3.98	□□□□□ -1.77
REX3	YLR107W	PRB1	P09232	635 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms