RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C UBA4P38820 440 aa2.97□□□□□ -1.93
SDO1YLR022C TDA11P38854 504 aa2.97□□□□□ -1.93
SDO1YLR022C YEL073CP39974 107 aa2.97□□□□□ -1.93
SDO1YLR022C YEL028WP39989 153 aa2.97□□□□□ -1.93
SDO1YLR022C DPH1P40487 425 aaKnown RBP2.97□□□□□ -1.93
SDO1YLR022C IBA57P47158 497 aa2.97□□□□□ -1.93
SDO1YLR022C RPN14P53196 417 aa2.97□□□□□ -1.93
SDO1YLR022C MRS2Q01926 470 aa2.97□□□□□ -1.93
SDO1YLR022C YKU80Q04437 629 aa2.97□□□□□ -1.93
SDO1YLR022C PGC1Q08959 321 aa2.97□□□□□ -1.93
SDO1YLR022C SMF3Q12078 473 aaPredicted RBP2.97□□□□□ -1.93
SDO1YLR022C SEC53P07283 254 aaKnown RBP2.96□□□□□ -1.94
SDO1YLR022C PUT4P15380 627 aa2.96□□□□□ -1.94
SDO1YLR022C CKA1P15790 372 aa2.96□□□□□ -1.94
SDO1YLR022C PDX1P16451 410 aa2.96□□□□□ -1.94
SDO1YLR022C KRR1P25586 316 aaPredicted RBP2.96□□□□□ -1.94
SDO1YLR022C PHO90P39535 881 aa2.96□□□□□ -1.94
SDO1YLR022C LSM5P40089 93 aaKnown RBP2.96□□□□□ -1.94
SDO1YLR022C JEM1P40358 645 aa2.96□□□□□ -1.94
SDO1YLR022C YIR014WP40570 242 aa2.96□□□□□ -1.94
SDO1YLR022C AXL1P40851 1208 aa2.96□□□□□ -1.94
SDO1YLR022C YJL132WP47014 750 aa2.96□□□□□ -1.94
SDO1YLR022C ATP22P50273 684 aaPredicted RBP2.96□□□□□ -1.94
SDO1YLR022C MAL12P53341 584 aa2.96□□□□□ -1.94
SDO1YLR022C MKC7P53379 596 aa2.96□□□□□ -1.94
SDO1YLR022C CRZ1P53968 678 aa2.96□□□□□ -1.94
SDO1YLR022C SED5Q01590 340 aa2.96□□□□□ -1.94
SDO1YLR022C SWC7Q06707 132 aa2.96□□□□□ -1.94
SDO1YLR022C BSC1Q12140 328 aa2.96□□□□□ -1.94
SDO1YLR022C YOL107WQ12239 342 aa2.96□□□□□ -1.94
SDO1YLR022C VCX1Q99385 411 aa2.96□□□□□ -1.94
SDO1YLR022C GAL7P08431 366 aa2.95□□□□□ -1.94
SDO1YLR022C SPS100P13130 326 aa2.95□□□□□ -1.94
SDO1YLR022C MET8P15807 274 aa2.95□□□□□ -1.94
SDO1YLR022C PDA1P16387 420 aaKnown RBP2.95□□□□□ -1.94
SDO1YLR022C RPB8P20436 146 aa2.95□□□□□ -1.94
SDO1YLR022C YSR3P23501 404 aa2.95□□□□□ -1.94
SDO1YLR022C DCC1P25559 380 aa2.95□□□□□ -1.94
SDO1YLR022C BMH1P29311 267 aaKnown RBP2.95□□□□□ -1.94
SDO1YLR022C SPC110P32380 944 aa2.95□□□□□ -1.94
SDO1YLR022C SFC1P33303 322 aa2.95□□□□□ -1.94
SDO1YLR022C BYE1P36106 594 aa2.95□□□□□ -1.94
SDO1YLR022C IFA38P38286 347 aa2.95□□□□□ -1.94
SDO1YLR022C MMS21P38632 267 aa2.95□□□□□ -1.94
SDO1YLR022C DBP8P38719 431 aa2.95□□□□□ -1.94
SDO1YLR022C RGI2P40188 164 aa2.95□□□□□ -1.94
SDO1YLR022C PKP1P40530 394 aa2.95□□□□□ -1.94
SDO1YLR022C ARC1P46672 376 aaKnown RBP2.95□□□□□ -1.94
SDO1YLR022C LCL3P53153 274 aa2.95□□□□□ -1.94
SDO1YLR022C TIM13P53299 105 aa2.95□□□□□ -1.94
SDO1YLR022C ZRG17P53735 605 aa2.95□□□□□ -1.94
SDO1YLR022C FRE4P53746 719 aa2.95□□□□□ -1.94
SDO1YLR022C IST1P53843 298 aaPredicted RBP2.95□□□□□ -1.94
SDO1YLR022C CCE1Q03702 353 aa2.95□□□□□ -1.94
SDO1YLR022C SNO4Q04902 237 aa2.95□□□□□ -1.94
SDO1YLR022C HSP33Q08914 237 aaKnown RBP2.95□□□□□ -1.94
SDO1YLR022C HSP32Q08992 237 aa2.95□□□□□ -1.94
SDO1YLR022C YLR302CO13544 120 aa2.94□□□□□ -1.94
SDO1YLR022C YML002WP0CF17 737 aa2.94□□□□□ -1.94
SDO1YLR022C KAR3P17119 729 aa2.94□□□□□ -1.94
SDO1YLR022C PRP2P20095 876 aaPredicted RBP2.94□□□□□ -1.94
SDO1YLR022C SGV1P23293 657 aaKnown RBP2.94□□□□□ -1.94
SDO1YLR022C BUB3P26449 341 aa2.94□□□□□ -1.94
SDO1YLR022C UBC6P33296 250 aaPredicted RBP2.94□□□□□ -1.94
SDO1YLR022C RIM2P38127 377 aa2.94□□□□□ -1.94
SDO1YLR022C YBL029WP38201 376 aa2.94□□□□□ -1.94
SDO1YLR022C PFK26P40433 827 aaKnown RBP2.94□□□□□ -1.94
SDO1YLR022C IST3P40565 148 aaPredicted RBP2.94□□□□□ -1.94
SDO1YLR022C SNZ3P43545 298 aa2.94□□□□□ -1.94
SDO1YLR022C ROK1P45818 564 aaPredicted RBP2.94□□□□□ -1.94
SDO1YLR022C TCB2P48231 1178 aa2.94□□□□□ -1.94
SDO1YLR022C YGR016WP53209 190 aa2.94□□□□□ -1.94
SDO1YLR022C SNZ2P53824 298 aa2.94□□□□□ -1.94
SDO1YLR022C LDB18Q07887 179 aa2.94□□□□□ -1.94
SDO1YLR022C YOR376WQ08900 122 aa2.94□□□□□ -1.94
SDO1YLR022C MDM32Q12171 622 aa2.94□□□□□ -1.94
SDO1YLR022C ISA2Q12425 185 aa2.94□□□□□ -1.94
SDO1YLR022C ERG27Q12452 347 aaKnown RBP2.94□□□□□ -1.94
SDO1YLR022C OCA6Q12454 224 aa2.94□□□□□ -1.94
SDO1YLR022C UBR1P19812 1950 aa2.93□□□□□ -1.94
SDO1YLR022C RPS3P05750 240 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C CDC33P07260 213 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C TYR1P20049 452 aa2.93□□□□□ -1.94
SDO1YLR022C OLE1P21147 510 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C OCA4P25366 362 aa2.93□□□□□ -1.94
SDO1YLR022C FAA1P30624 700 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C PMT2P31382 759 aa2.93□□□□□ -1.94
SDO1YLR022C MEI5P32489 222 aa2.93□□□□□ -1.94
SDO1YLR022C AEP1P32493 518 aa2.93□□□□□ -1.94
SDO1YLR022C MTR2P34232 184 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C OM14P38325 134 aa2.93□□□□□ -1.94
SDO1YLR022C YDR089WP38966 869 aa2.93□□□□□ -1.94
SDO1YLR022C GIM4P40005 111 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C VMA13P41807 478 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C RPS0BP46654 252 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C BUD13P46947 266 aaPredicted RBP2.93□□□□□ -1.94
SDO1YLR022C PHO86P46956 311 aa2.93□□□□□ -1.94
SDO1YLR022C BTN2P53286 410 aa2.93□□□□□ -1.94
SDO1YLR022C HST1P53685 503 aa2.93□□□□□ -1.94
SDO1YLR022C TIM10P87108 93 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms