RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W MRM2P53123 320 aa5.05□□□□□ -1.6
CBF1YJR060W SGF73P53165 657 aa5.05□□□□□ -1.6
CBF1YJR060W CUS2P53830 285 aaPredicted RBP5.05□□□□□ -1.6
CBF1YJR060W PRO2P54885 456 aaKnown RBP5.05□□□□□ -1.6
CBF1YJR060W YAT1P80235 687 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-DR2Q03483 438 aa5.05□□□□□ -1.6
CBF1YJR060W YKU80Q04437 629 aa5.05□□□□□ -1.6
CBF1YJR060W ROY1Q04847 553 aa5.05□□□□□ -1.6
CBF1YJR060W IZH3Q07959 543 aa5.05□□□□□ -1.6
CBF1YJR060W YLR049CQ12110 428 aa5.05□□□□□ -1.6
CBF1YJR060W HUA2Q12134 243 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-BQ12260 438 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-OR2Q12293 438 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-DR1Q12392 438 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-OR1Q12439 438 aa5.05□□□□□ -1.6
CBF1YJR060W TY2A-DR3Q99303 438 aa5.05□□□□□ -1.6
CBF1YJR060W SAS5Q99314 248 aa5.05□□□□□ -1.6
CBF1YJR060W GAL4P04386 881 aa5.04□□□□□ -1.6
CBF1YJR060W ART10P18634 518 aaKnown RBP5.04□□□□□ -1.6
CBF1YJR060W MEI5P32489 222 aa5.04□□□□□ -1.6
CBF1YJR060W NIP1P32497 812 aaKnown RBP5.04□□□□□ -1.6
CBF1YJR060W CTP1P38152 299 aa5.04□□□□□ -1.6
CBF1YJR060W YBR062CP38239 180 aa5.04□□□□□ -1.6
CBF1YJR060W YDR089WP38966 869 aa5.04□□□□□ -1.6
CBF1YJR060W SEC31P38968 1273 aaKnown RBP5.04□□□□□ -1.6
CBF1YJR060W IRC6P43615 237 aa5.04□□□□□ -1.6
CBF1YJR060W NAS6P50086 228 aa5.04□□□□□ -1.6
CBF1YJR060W SDT1P53078 280 aa5.04□□□□□ -1.6
CBF1YJR060W CSL4P53859 292 aaPredicted RBP5.04□□□□□ -1.6
CBF1YJR060W YNL140CP53910 189 aa5.04□□□□□ -1.6
CBF1YJR060W GAS3Q03655 524 aa5.04□□□□□ -1.6
CBF1YJR060W RAD34Q06665 692 aa5.04□□□□□ -1.6
CBF1YJR060W UAF30Q08747 228 aa5.04□□□□□ -1.6
CBF1YJR060W YOL107WQ12239 342 aa5.04□□□□□ -1.6
CBF1YJR060W PNO1Q99216 274 aaKnown RBP5.04□□□□□ -1.6
CBF1YJR060W YPT6Q99260 215 aa5.04□□□□□ -1.6
CBF1YJR060W SIR3P06701 978 aa5.03□□□□□ -1.6
CBF1YJR060W GAL7P08431 366 aa5.03□□□□□ -1.6
CBF1YJR060W PRP2P20095 876 aaPredicted RBP5.03□□□□□ -1.6
CBF1YJR060W OCA4P25366 362 aa5.03□□□□□ -1.6
CBF1YJR060W MRP20P32387 263 aa5.03□□□□□ -1.6
CBF1YJR060W TOA1P32773 286 aa5.03□□□□□ -1.6
CBF1YJR060W KKQ8P36004 724 aa5.03□□□□□ -1.6
CBF1YJR060W CAF4P36130 643 aa5.03□□□□□ -1.6
CBF1YJR060W LEU5P38702 357 aa5.03□□□□□ -1.6
CBF1YJR060W ARN1P38731 627 aa5.03□□□□□ -1.6
CBF1YJR060W APQ12P40532 138 aa5.03□□□□□ -1.6
CBF1YJR060W SEC27P41811 889 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W HOC1P47124 396 aa5.03□□□□□ -1.6
CBF1YJR060W DUO1P53168 247 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W ERG26P53199 349 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W YNL010WP53981 241 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W IDP3P53982 420 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W IRC15Q02733 499 aa5.03□□□□□ -1.6
CBF1YJR060W EFR3Q03653 782 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W ECM11Q04110 302 aa5.03□□□□□ -1.6
CBF1YJR060W BSC6Q08280 497 aa5.03□□□□□ -1.6
CBF1YJR060W GET4Q12125 312 aa5.03□□□□□ -1.6
CBF1YJR060W NMD4Q12129 218 aa5.03□□□□□ -1.6
CBF1YJR060W SCM3Q12334 223 aa5.03□□□□□ -1.6
CBF1YJR060W ERG27Q12452 347 aaKnown RBP5.03□□□□□ -1.6
CBF1YJR060W RRP36Q12481 300 aaPredicted RBP5.03□□□□□ -1.6
CBF1YJR060W YLR111WQ12528 110 aa5.03□□□□□ -1.6
CBF1YJR060W CYR1P08678 2026 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W RNA1P11745 407 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W EXO70P19658 623 aa5.02□□□□□ -1.61
CBF1YJR060W DBR1P24309 405 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W YCR061WP25639 631 aa5.02□□□□□ -1.61
CBF1YJR060W CDC5P32562 705 aa5.02□□□□□ -1.61
CBF1YJR060W WBP1P33767 430 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W MTH1P35198 433 aa5.02□□□□□ -1.61
CBF1YJR060W ELF1P36053 145 aa5.02□□□□□ -1.61
CBF1YJR060W FMP46P36141 133 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W MRPL15P36523 253 aa5.02□□□□□ -1.61
CBF1YJR060W FTH1P38310 465 aa5.02□□□□□ -1.61
CBF1YJR060W MET18P40469 1032 aa5.02□□□□□ -1.61
CBF1YJR060W ARF3P40994 183 aaRIP-Chip data5.02□□□□□ -1.61not detected
CBF1YJR060W CCT7P42943 550 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W GTO1P48239 356 aa5.02□□□□□ -1.61
CBF1YJR060W YPT32P51996 222 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W YSA1Q01976 231 aa5.02□□□□□ -1.61
CBF1YJR060W RPM2Q02773 1202 aa5.02□□□□□ -1.61
CBF1YJR060W LGE1Q02796 332 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W FMN1Q03778 218 aa5.02□□□□□ -1.61
CBF1YJR060W RRP45Q05636 305 aaKnown RBP5.02□□□□□ -1.61
CBF1YJR060W YLR413WQ06689 675 aa5.02□□□□□ -1.61
CBF1YJR060W YDL086WQ07505 273 aa5.02□□□□□ -1.61
CBF1YJR060W ESA1Q08649 445 aa5.02□□□□□ -1.61
CBF1YJR060W YBR126W-AQ8TGU7 68 aa5.02□□□□□ -1.61
CBF1YJR060W Q0010Q9ZZX9 128 aa5.02□□□□□ -1.61
CBF1YJR060W CAR1P00812 333 aaKnown RBP5.01□□□□□ -1.61
CBF1YJR060W GCN4P03069 281 aa5.01□□□□□ -1.61
CBF1YJR060W HXK2P04807 486 aaKnown RBP5.01□□□□□ -1.61
CBF1YJR060W YMR085WP0CF18 432 aa5.01□□□□□ -1.61
CBF1YJR060W CDC43P18898 376 aa5.01□□□□□ -1.61
CBF1YJR060W OLE1P21147 510 aaKnown RBP5.01□□□□□ -1.61
CBF1YJR060W SGV1P23293 657 aaKnown RBP5.01□□□□□ -1.61
CBF1YJR060W ERG8P24521 451 aa5.01□□□□□ -1.61
CBF1YJR060W GLG1P36143 616 aa5.01□□□□□ -1.61
CBF1YJR060W ASC1P38011 319 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms