RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W MHF1Q3E835 90 aa5.72□□□□□ -1.49
RPN11YFR004W HRP1Q99383 534 aaKnown RBP5.72□□□□□ -1.49
RPN11YFR004W Q0010Q9ZZX9 128 aa5.72□□□□□ -1.49
RPN11YFR004W RSR1P13856 272 aa5.71□□□□□ -1.5
RPN11YFR004W GRR1P24814 1151 aa5.71□□□□□ -1.5
RPN11YFR004W RFA2P26754 273 aaKnown RBP5.71□□□□□ -1.5
RPN11YFR004W SPS19P32573 292 aaKnown RBP5.71□□□□□ -1.5
RPN11YFR004W TAF14P35189 244 aa5.71□□□□□ -1.5
RPN11YFR004W SOL2P37262 315 aa5.71□□□□□ -1.5
RPN11YFR004W YPK3P38070 525 aa5.71□□□□□ -1.5
RPN11YFR004W UBA4P38820 440 aa5.71□□□□□ -1.5
RPN11YFR004W LSM5P40089 93 aaKnown RBP5.71□□□□□ -1.5
RPN11YFR004W COG3P40094 801 aa5.71□□□□□ -1.5
RPN11YFR004W CAF16P43569 289 aa5.71□□□□□ -1.5
RPN11YFR004W YFR018CP43599 363 aa5.71□□□□□ -1.5
RPN11YFR004W PMT4P46971 762 aa5.71□□□□□ -1.5
RPN11YFR004W BIR1P47134 954 aa5.71□□□□□ -1.5
RPN11YFR004W GCV1P48015 400 aa5.71□□□□□ -1.5
RPN11YFR004W TOM22P49334 152 aa5.71□□□□□ -1.5
RPN11YFR004W ATP22P50273 684 aaPredicted RBP5.71□□□□□ -1.5
RPN11YFR004W DAM1P53267 343 aa5.71□□□□□ -1.5
RPN11YFR004W SNF12P53628 566 aa5.71□□□□□ -1.5
RPN11YFR004W VHS1Q03785 461 aa5.71□□□□□ -1.5
RPN11YFR004W MGR3Q04472 501 aa5.71□□□□□ -1.5
RPN11YFR004W VID22Q05934 901 aa5.71□□□□□ -1.5
RPN11YFR004W DIC1Q06143 298 aa5.71□□□□□ -1.5
RPN11YFR004W YOL024WQ08172 172 aa5.71□□□□□ -1.5
RPN11YFR004W TRM8Q12009 286 aa5.71□□□□□ -1.5
RPN11YFR004W RGT2Q12300 763 aa5.71□□□□□ -1.5
RPN11YFR004W YOR012WQ12351 137 aa5.71□□□□□ -1.5
RPN11YFR004W GTT2Q12390 233 aa5.71□□□□□ -1.5
RPN11YFR004W RPN13O13563 156 aa5.7□□□□□ -1.5
RPN11YFR004W IPP1P00817 287 aaKnown RBP5.7□□□□□ -1.5
RPN11YFR004W REP1P03871 373 aa5.7□□□□□ -1.5
RPN11YFR004W GAL1P04385 528 aa5.7□□□□□ -1.5
RPN11YFR004W STE3P06783 470 aa5.7□□□□□ -1.5
RPN11YFR004W RPL11AP0C0W9 174 aaKnown RBP5.7□□□□□ -1.5
RPN11YFR004W MET8P15807 274 aa5.7□□□□□ -1.5
RPN11YFR004W APA1P16550 321 aaKnown RBP5.7□□□□□ -1.5
RPN11YFR004W RHB1P25378 209 aa5.7□□□□□ -1.5
RPN11YFR004W MRPL6P32904 214 aa5.7□□□□□ -1.5
RPN11YFR004W YRO2P38079 344 aa5.7□□□□□ -1.5
RPN11YFR004W SOP4P39543 234 aaPredicted RBP5.7□□□□□ -1.5
RPN11YFR004W YEL073CP39974 107 aa5.7□□□□□ -1.5
RPN11YFR004W LEM3P42838 414 aa5.7□□□□□ -1.5
RPN11YFR004W SPG5P42933 373 aa5.7□□□□□ -1.5
RPN11YFR004W IRC6P43615 237 aa5.7□□□□□ -1.5
RPN11YFR004W NIT2P47016 307 aa5.7□□□□□ -1.5
RPN11YFR004W AIM22P47051 409 aa5.7□□□□□ -1.5
RPN11YFR004W YNL181WP53878 407 aa5.7□□□□□ -1.5
RPN11YFR004W YNL140CP53910 189 aa5.7□□□□□ -1.5
RPN11YFR004W COG5P53951 403 aa5.7□□□□□ -1.5
RPN11YFR004W IRC15Q02733 499 aa5.7□□□□□ -1.5
RPN11YFR004W YPL107WQ02873 248 aa5.7□□□□□ -1.5
RPN11YFR004W RSC9Q03124 581 aa5.7□□□□□ -1.5
RPN11YFR004W ARX1Q03862 593 aaKnown RBP5.7□□□□□ -1.5
RPN11YFR004W KRE28Q04431 385 aa5.7□□□□□ -1.5
RPN11YFR004W DBP9Q06218 594 aaKnown RBP5.7□□□□□ -1.5
RPN11YFR004W COS7Q07788 383 aa5.7□□□□□ -1.5
RPN11YFR004W MCA1Q08601 432 aa5.7□□□□□ -1.5
RPN11YFR004W GUP2Q08929 609 aa5.7□□□□□ -1.5
RPN11YFR004W YGK3Q12222 375 aaPredicted RBP5.7□□□□□ -1.5
RPN11YFR004W RRP42Q12277 265 aaPredicted RBP5.7□□□□□ -1.5
RPN11YFR004W YPL119C-AQ3E751 87 aa5.7□□□□□ -1.5
RPN11YFR004W RPL11BQ3E757 174 aaPredicted RBP5.7□□□□□ -1.5
RPN11YFR004W MF(ALPHA)1P01149 165 aa5.69□□□□□ -1.5
RPN11YFR004W FUM1P08417 488 aaKnown RBP5.69□□□□□ -1.5
RPN11YFR004W GAL3P13045 520 aa5.69□□□□□ -1.5
RPN11YFR004W ENA1P13587 1091 aa5.69□□□□□ -1.5
RPN11YFR004W EPT1P22140 391 aa5.69□□□□□ -1.5
RPN11YFR004W FPS1P23900 669 aa5.69□□□□□ -1.5
RPN11YFR004W RER1P25560 188 aa5.69□□□□□ -1.5
RPN11YFR004W LDB16P25587 256 aa5.69□□□□□ -1.5
RPN11YFR004W IDH2P28241 369 aaKnown RBP5.69□□□□□ -1.5
RPN11YFR004W RPC82P32349 654 aa5.69□□□□□ -1.5
RPN11YFR004W HXT4P32467 576 aa5.69□□□□□ -1.5
RPN11YFR004W GSH1P32477 678 aa5.69□□□□□ -1.5
RPN11YFR004W CDC13P32797 924 aaKnown RBP5.69□□□□□ -1.5
RPN11YFR004W NUF2P33895 451 aa5.69□□□□□ -1.5
RPN11YFR004W EMC3P36039 253 aa5.69□□□□□ -1.5
RPN11YFR004W MRPL37P36532 105 aa5.69□□□□□ -1.5
RPN11YFR004W CBP4P37267 147 aa5.69□□□□□ -1.5
RPN11YFR004W ARA1P38115 344 aa5.69□□□□□ -1.5
RPN11YFR004W TSL1P38427 1098 aaKnown RBP5.69□□□□□ -1.5
RPN11YFR004W INM1P38710 295 aa5.69□□□□□ -1.5
RPN11YFR004W DBP8P38719 431 aa5.69□□□□□ -1.5
RPN11YFR004W HXT6P39003 570 aaKnown RBP5.69□□□□□ -1.5
RPN11YFR004W HXT7P39004 570 aa5.69□□□□□ -1.5
RPN11YFR004W MNN9P39107 395 aaKnown RBP5.69□□□□□ -1.5
RPN11YFR004W FAU1P40099 211 aa5.69□□□□□ -1.5
RPN11YFR004W SOK1P40317 901 aa5.69□□□□□ -1.5
RPN11YFR004W MPM1P40364 252 aa5.69□□□□□ -1.5
RPN11YFR004W SSU1P41930 458 aa5.69□□□□□ -1.5
RPN11YFR004W CAK1P43568 368 aaPredicted RBP5.69□□□□□ -1.5
RPN11YFR004W MUP1P50276 574 aa5.69□□□□□ -1.5
RPN11YFR004W YGR015CP53208 328 aa5.69□□□□□ -1.5
RPN11YFR004W SOK2P53438 785 aaPredicted RBP5.69□□□□□ -1.5
RPN11YFR004W CIK1Q01649 594 aa5.69□□□□□ -1.5
RPN11YFR004W ENA2Q01896 1091 aa5.69□□□□□ -1.5
RPN11YFR004W TRS23Q03784 219 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms