RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	ASP1	P38986	381 aa	Predicted RBP	0.21	□□□□□ -2.38
SPG3	YDR504C	RBG1	P39729	369 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	YEL057C	P39983	233 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	PCL7	P40186	285 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	HXT14	P42833	540 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	KEG1	P43614	200 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	RPS0B	P46654	252 aa	Known RBP	0.21	□□□□□ -2.38
SPG3	YDR504C	VAC7	P53950	1165 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	RMI1	Q02685	241 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	YPL113C	Q02961	396 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	NCA2	Q12374	616 aa		0.21	□□□□□ -2.38
SPG3	YDR504C	MET8	P15807	274 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	SPS19	P32573	292 aa	Known RBP	0.2	□□□□□ -2.38
SPG3	YDR504C	CMC1	P36064	111 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	MUD2	P36084	527 aa	Known RBP	0.2	□□□□□ -2.38
SPG3	YDR504C	BDH1	P39714	382 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	IES5	P40060	125 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	UFE1	P41834	346 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	TOS3	P43637	560 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	PHO86	P46956	311 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	MSC3	Q05812	728 aa		0.2	□□□□□ -2.38
SPG3	YDR504C	HOM3	P10869	527 aa		0.19	□□□□□ -2.38
SPG3	YDR504C	RAD23	P32628	398 aa	Known RBP	0.19	□□□□□ -2.38
SPG3	YDR504C	ATP3	P38077	311 aa	Known RBP	0.19	□□□□□ -2.38
SPG3	YDR504C	ECM8	P38246	354 aa		0.19	□□□□□ -2.38
SPG3	YDR504C	HSH155	P49955	971 aa	Known RBP	0.19	□□□□□ -2.38
SPG3	YDR504C	SHE4	P51534	789 aa		0.19	□□□□□ -2.38
SPG3	YDR504C	YML131W	Q03102	365 aa		0.19	□□□□□ -2.38
SPG3	YDR504C	ATG34	Q12292	412 aa		0.19	□□□□□ -2.38
SPG3	YDR504C	IMA3	P0CW40	589 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	IMA4	P0CW41	589 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	BEM1	P29366	551 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	YBR241C	P38142	488 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	SHE3	P38272	425 aa	Known RBP	0.18	□□□□□ -2.38
SPG3	YDR504C	RRP46	P53256	223 aa	Predicted RBP	0.18	□□□□□ -2.38
SPG3	YDR504C	MEP3	P53390	489 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	MRX11	Q03079	207 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	SNT309	Q06091	175 aa	Predicted RBP	0.18	□□□□□ -2.38
SPG3	YDR504C	RLP24	Q07915	199 aa	Known RBP	0.18	□□□□□ -2.38
SPG3	YDR504C	SIL1	Q08199	421 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	IMA2	Q08295	589 aa		0.18	□□□□□ -2.38
SPG3	YDR504C	COX10	P21592	462 aa		0.17	□□□□□ -2.38
SPG3	YDR504C	RAD5	P32849	1169 aa	Predicted RBP	0.17	□□□□□ -2.38
SPG3	YDR504C	MMS4	P38257	691 aa		0.17	□□□□□ -2.38
SPG3	YDR504C	CTK3	P46963	296 aa	Predicted RBP	0.17	□□□□□ -2.38
SPG3	YDR504C	RNH201	P53942	307 aa		0.17	□□□□□ -2.38
SPG3	YDR504C	ATG29	Q12092	213 aa		0.17	□□□□□ -2.38
SPG3	YDR504C	TDH2	P00358	332 aa	Known RBP	0.16	□□□□□ -2.38
SPG3	YDR504C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
SPG3	YDR504C	MET2	P08465	486 aa		0.16	□□□□□ -2.38
SPG3	YDR504C	HPR1	P17629	752 aa	Known RBP	0.16	□□□□□ -2.38
SPG3	YDR504C	KRE2	P27809	442 aa		0.16	□□□□□ -2.38
SPG3	YDR504C	MYO5	Q04439	1219 aa	Known RBP	0.16	□□□□□ -2.38
SPG3	YDR504C	SSC1	P0CS90	654 aa	Known RBP	0.15	□□□□□ -2.39
SPG3	YDR504C	CUP2	P15315	225 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	GEX1	P25596	615 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	YMR262W	P38430	313 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	VPS75	P53853	264 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	URH1	Q04179	340 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	YOL029C	Q08187	201 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	RKM1	Q08961	583 aa	Predicted RBP	0.15	□□□□□ -2.39
SPG3	YDR504C	YOR283W	Q12040	230 aa	Known RBP	0.15	□□□□□ -2.39
SPG3	YDR504C	SFM1	Q12314	213 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	HIF1	Q12373	385 aa		0.15	□□□□□ -2.39
SPG3	YDR504C	SCEI	P03882	235 aa		0.14	□□□□□ -2.39
SPG3	YDR504C	KRE1	P17260	313 aa		0.14	□□□□□ -2.39
SPG3	YDR504C	ANP1	P32629	500 aa		0.14	□□□□□ -2.39
SPG3	YDR504C	REX2	P54964	269 aa	Known RBP	0.14	□□□□□ -2.39
SPG3	YDR504C	YPL080C	Q02826	108 aa		0.14	□□□□□ -2.39
SPG3	YDR504C	YMR018W	Q04364	514 aa		0.14	□□□□□ -2.39
SPG3	YDR504C	POM152	P39685	1337 aa		0.13	□□□□□ -2.39
SPG3	YDR504C	CPT1	P17898	393 aa		0.13	□□□□□ -2.39
SPG3	YDR504C	HXT3	P32466	567 aa	Known RBP	0.13	□□□□□ -2.39
SPG3	YDR504C	SPO23	P33757	523 aa		0.13	□□□□□ -2.39
SPG3	YDR504C	SED5	Q01590	340 aa		0.13	□□□□□ -2.39
SPG3	YDR504C	SMD1	Q02260	146 aa	Predicted RBP	0.13	□□□□□ -2.39
SPG3	YDR504C	STD1	Q02794	444 aa		0.13	□□□□□ -2.39
SPG3	YDR504C	GTO3	Q04806	366 aa		0.13	□□□□□ -2.39
SPG3	YDR504C	RPS18A	P0CX55	146 aa	Known RBP	0.12	□□□□□ -2.39
SPG3	YDR504C	RPS18B	P0CX56	146 aa	Predicted RBP	0.12	□□□□□ -2.39
SPG3	YDR504C	DAL81	P21657	970 aa		0.12	□□□□□ -2.39
SPG3	YDR504C	CHA1	P25379	360 aa	Known RBP	0.12	□□□□□ -2.39
SPG3	YDR504C	SMC2	P38989	1170 aa	Known RBP	0.12	□□□□□ -2.39
SPG3	YDR504C	ASN2	P49090	572 aa	Known RBP	0.12	□□□□□ -2.39
SPG3	YDR504C	TFS1	P14306	219 aa		0.11	□□□□□ -2.39
SPG3	YDR504C	YEL043W	P32618	956 aa		0.11	□□□□□ -2.39
SPG3	YDR504C	SHE1	P38200	338 aa		0.11	□□□□□ -2.39
SPG3	YDR504C	YGR015C	P53208	328 aa		0.11	□□□□□ -2.39
SPG3	YDR504C	API2	Q04413	109 aa		0.11	□□□□□ -2.39
SPG3	YDR504C	PEX30	Q06169	523 aa		0.11	□□□□□ -2.39
SPG3	YDR504C	STE2	D6VTK4	431 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	UNG1	P12887	359 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	RPL3	P14126	387 aa	Known RBP	0.1	□□□□□ -2.39
SPG3	YDR504C	NOP4	P37838	685 aa	Known RBP	0.1	□□□□□ -2.39
SPG3	YDR504C	RMD8	P43620	662 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	APC4	Q04601	652 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	VAM3	Q12241	283 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	HMS1	Q12398	434 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	PCL9	Q12477	304 aa		0.1	□□□□□ -2.39
SPG3	YDR504C	SEM1	O94742	89 aa		0.09	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms