RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeast

Gene RUB1, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUB1	YDR139C	STE24	P47154	453 aa		3.02	□□□□□ -1.93
RUB1	YDR139C	RSC1	P53236	928 aa		3.02	□□□□□ -1.93
RUB1	YDR139C	SPR6	Q01684	191 aa		3.02	□□□□□ -1.93
RUB1	YDR139C	BSC6	Q08280	497 aa		3.02	□□□□□ -1.93
RUB1	YDR139C	RNH203	Q12338	110 aa		3.02	□□□□□ -1.93
RUB1	YDR139C	SOD1	P00445	154 aa	Known RBP	3.01	□□□□□ -1.93
RUB1	YDR139C	SSC1	P0CS90	654 aa	Known RBP	3.01	□□□□□ -1.93
RUB1	YDR139C	RPL1A	P0CX43	217 aa	Known RBP	3.01	□□□□□ -1.93
RUB1	YDR139C	RPL1B	P0CX44	217 aa	Known RBP	3.01	□□□□□ -1.93
RUB1	YDR139C	ATM1	P40416	690 aa		3.01	□□□□□ -1.93
RUB1	YDR139C	COS1	P53822	381 aa		3.01	□□□□□ -1.93
RUB1	YDR139C	TDA1	Q03533	586 aa		3.01	□□□□□ -1.93
RUB1	YDR139C	OPI3	P05375	206 aa		3	□□□□□ -1.93
RUB1	YDR139C	TPK3	P05986	398 aa		3	□□□□□ -1.93
RUB1	YDR139C	ARF1	P11076	181 aa	Known RBP	3	□□□□□ -1.93
RUB1	YDR139C	NAT1	P12945	854 aa	Known RBP	3	□□□□□ -1.93
RUB1	YDR139C	MNE1	P24720	663 aa		3	□□□□□ -1.93
RUB1	YDR139C	YSC83	P32792	385 aa		3	□□□□□ -1.93
RUB1	YDR139C	RAD5	P32849	1169 aa	Predicted RBP	3	□□□□□ -1.93
RUB1	YDR139C	SPT10	P35208	640 aa		3	□□□□□ -1.93
RUB1	YDR139C	DOA1	P36037	715 aa		3	□□□□□ -1.93
RUB1	YDR139C	UTH1	P36135	365 aa		3	□□□□□ -1.93
RUB1	YDR139C	OXA1	P39952	402 aa		3	□□□□□ -1.93
RUB1	YDR139C	EFM4	P40516	257 aa		3	□□□□□ -1.93
RUB1	YDR139C	EGT2	P42835	1041 aa		3	□□□□□ -1.93
RUB1	YDR139C	CLD1	P53264	445 aa		3	□□□□□ -1.93
RUB1	YDR139C	CRH1	P53301	507 aa		3	□□□□□ -1.93
RUB1	YDR139C	TSA2	Q04120	196 aa		3	□□□□□ -1.93
RUB1	YDR139C	ECM7	Q06200	448 aa		3	□□□□□ -1.93
RUB1	YDR139C	YOP1	Q12402	180 aa		3	□□□□□ -1.93
RUB1	YDR139C	PAR32	Q12515	295 aa	Known RBP	3	□□□□□ -1.93
RUB1	YDR139C	HTZ1	Q12692	134 aa	Known RBP	3	□□□□□ -1.93
RUB1	YDR139C	YCR024C-B	Q3E7Z8	88 aa		3	□□□□□ -1.93
RUB1	YDR139C	RPL12A	P0CX53	165 aa	Known RBP	2.99	□□□□□ -1.93
RUB1	YDR139C	RPL12B	P0CX54	165 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
RUB1	YDR139C	MCR1	P36060	302 aa	Known RBP	2.99	□□□□□ -1.93
RUB1	YDR139C	GDI1	P39958	451 aa	Known RBP	2.99	□□□□□ -1.93
RUB1	YDR139C	BNS1	P50084	137 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	PMT5	P52867	743 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	RTT102	P53330	157 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	TRM112	P53738	135 aa	Predicted RBP	2.99	□□□□□ -1.93
RUB1	YDR139C	MEH1	Q02205	184 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	URC2	Q04411	772 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	LIP2	Q06005	328 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	AAD15	Q08361	143 aa		2.99	□□□□□ -1.93
RUB1	YDR139C	BAT1	P38891	393 aa	Known RBP	2.98	□□□□□ -1.93
RUB1	YDR139C	PTI1	P39927	425 aa	Predicted RBP	2.98	□□□□□ -1.93
RUB1	YDR139C	ATG18	P43601	500 aa		2.98	□□□□□ -1.93
RUB1	YDR139C	TOS2	P50078	622 aa		2.98	□□□□□ -1.93
RUB1	YDR139C	YPR091C	Q06833	770 aa		2.98	□□□□□ -1.93
RUB1	YDR139C	NAG1	Q8TGN9	163 aa		2.98	□□□□□ -1.93
RUB1	YDR139C	MDL1	P33310	695 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	ANR2	P36090	516 aa	Predicted RBP	2.97	□□□□□ -1.93
RUB1	YDR139C	GPX2	P38143	162 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	KAP104	P38217	918 aa	Known RBP	2.97	□□□□□ -1.93
RUB1	YDR139C	PFF1	P38244	976 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	DED81	P38707	554 aa	Known RBP	2.97	□□□□□ -1.93
RUB1	YDR139C	MNL1	P38888	796 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	YNL208W	P40159	199 aa	Known RBP	2.97	□□□□□ -1.93
RUB1	YDR139C	ASN2	P49090	572 aa	Known RBP	2.97	□□□□□ -1.93
RUB1	YDR139C	RRN9	P53437	365 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	YET2	Q04210	160 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	ASA1	Q06822	443 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	YDL114W	Q07530	308 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	FCY22	Q12119	530 aa		2.97	□□□□□ -1.93
RUB1	YDR139C	MRP21	P38175	177 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	OM14	P38325	134 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	GEP4	P38812	185 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	MLH1	P38920	769 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	IPK1	Q06667	281 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	MFG1	Q07684	458 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	PCL9	Q12477	304 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	SRN2	Q99176	213 aa		2.96	□□□□□ -1.94
RUB1	YDR139C	CDC50	P25656	391 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	TIR2	P33890	251 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	ECM8	P38246	354 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	YER186C	P40101	306 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	JEM1	P40358	645 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	AIP1	P46680	615 aa	Known RBP	2.95	□□□□□ -1.94
RUB1	YDR139C	ERO1	Q03103	563 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	NOP6	Q07623	225 aa	Known RBP	2.95	□□□□□ -1.94
RUB1	YDR139C	LDS2	Q08218	356 aa		2.95	□□□□□ -1.94
RUB1	YDR139C	MEX67	Q99257	599 aa	Known RBP	2.95	□□□□□ -1.94
RUB1	YDR139C	RNA1	P11745	407 aa	Known RBP	2.94	□□□□□ -1.94
RUB1	YDR139C	RRP7	P25368	297 aa	Predicted RBP	2.94	□□□□□ -1.94
RUB1	YDR139C	FUN26	P31381	517 aa		2.94	□□□□□ -1.94
RUB1	YDR139C	IES6	P32617	166 aa		2.94	□□□□□ -1.94
RUB1	YDR139C	TOA2	P32774	122 aa		2.94	□□□□□ -1.94
RUB1	YDR139C	SEC28	P40509	296 aa	Known RBP	2.94	□□□□□ -1.94
RUB1	YDR139C	YIP5	P53108	310 aa		2.94	□□□□□ -1.94
RUB1	YDR139C	MLC1	P53141	149 aa		2.94	□□□□□ -1.94
RUB1	YDR139C	SKI8	Q02793	397 aa	Predicted RBP	2.94	□□□□□ -1.94
RUB1	YDR139C	EPL1	P43572	832 aa		2.93	□□□□□ -1.94
RUB1	YDR139C	YDL199C	Q12407	687 aa		2.93	□□□□□ -1.94
RUB1	YDR139C	PSK1	P31374	1356 aa		2.92	□□□□□ -1.94
RUB1	YDR139C	COX4	P04037	155 aa		2.92	□□□□□ -1.94
RUB1	YDR139C	PUP2	P32379	260 aa		2.92	□□□□□ -1.94
RUB1	YDR139C	SPO23	P33757	523 aa		2.92	□□□□□ -1.94
RUB1	YDR139C	MID2	P36027	376 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms