RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W FYV8P46949 817 aaKnown RBP5.55□□□□□ -1.52
TRP1YDR007W VMA10P48836 114 aaKnown RBP5.55□□□□□ -1.52
TRP1YDR007W VTI1Q04338 217 aa5.55□□□□□ -1.52
TRP1YDR007W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
TRP1YDR007W SMC5Q08204 1093 aa5.55□□□□□ -1.52
TRP1YDR007W TIP41Q12199 356 aa5.55□□□□□ -1.52
TRP1YDR007W YRM1Q12340 786 aa5.55□□□□□ -1.52
TRP1YDR007W YNL162W-AQ3E7A8 72 aa5.55□□□□□ -1.52
TRP1YDR007W BCK1Q01389 1478 aa5.55□□□□□ -1.52
TRP1YDR007W SCEIP03882 235 aa5.54□□□□□ -1.52
TRP1YDR007W YCR007CP25354 239 aa5.54□□□□□ -1.52
TRP1YDR007W PPZ1P26570 692 aa5.54□□□□□ -1.52
TRP1YDR007W ADH5P38113 351 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W YER137CP40083 148 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W PSA1P41940 361 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W SCD6P45978 349 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
TRP1YDR007W LIF1P53150 421 aa5.54□□□□□ -1.52
TRP1YDR007W YIF1P53845 314 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W CWC25P53854 179 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W SAM50P53969 484 aa5.54□□□□□ -1.52
TRP1YDR007W REX2P54964 269 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W RPM2Q02773 1202 aa5.54□□□□□ -1.52
TRP1YDR007W SNZ1Q03148 297 aa5.54□□□□□ -1.52
TRP1YDR007W MSS11Q03825 758 aa5.54□□□□□ -1.52
TRP1YDR007W RPN9Q04062 393 aaKnown RBP5.54□□□□□ -1.52
TRP1YDR007W THI7Q05998 598 aa5.54□□□□□ -1.52
TRP1YDR007W NRT1Q08485 598 aa5.54□□□□□ -1.52
TRP1YDR007W NCA2Q12374 616 aa5.54□□□□□ -1.52
TRP1YDR007W RSF2P46974 1380 aa5.54□□□□□ -1.52
TRP1YDR007W TUS1Q06412 1307 aa5.53□□□□□ -1.52
TRP1YDR007W TEF1P02994 458 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W ARG4P04076 463 aaPredicted RBP5.53□□□□□ -1.52
TRP1YDR007W RPL42AP0CX27 106 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W RPL42BP0CX28 106 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W YER190C-BP0CX94 160 aa5.53□□□□□ -1.52
TRP1YDR007W YEL077W-AP0CX95 160 aa5.53□□□□□ -1.52
TRP1YDR007W YGR296C-BP0CX96 160 aa5.53□□□□□ -1.52
TRP1YDR007W YPL283W-BP0CX97 160 aa5.53□□□□□ -1.52
TRP1YDR007W YPR204C-AP0CX98 160 aa5.53□□□□□ -1.52
TRP1YDR007W RAD57P25301 460 aa5.53□□□□□ -1.52
TRP1YDR007W MGR1P25573 417 aa5.53□□□□□ -1.52
TRP1YDR007W ACP1P32463 125 aa5.53□□□□□ -1.52
TRP1YDR007W VPS17P32913 551 aa5.53□□□□□ -1.52
TRP1YDR007W CPR5P35176 225 aa5.53□□□□□ -1.52
TRP1YDR007W SOR1P35497 357 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W VPS21P36017 210 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W RSM22P36056 628 aa5.53□□□□□ -1.52
TRP1YDR007W VPS51P36116 164 aa5.53□□□□□ -1.52
TRP1YDR007W SPC34P36131 295 aa5.53□□□□□ -1.52
TRP1YDR007W MRPL4P36517 319 aa5.53□□□□□ -1.52
TRP1YDR007W ATP3P38077 311 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W RRN10P38204 145 aa5.53□□□□□ -1.52
TRP1YDR007W GND1P38720 489 aaKnown RBP5.53□□□□□ -1.52
TRP1YDR007W FAU1P40099 211 aa5.53□□□□□ -1.52
TRP1YDR007W CSM2P40465 213 aa5.53□□□□□ -1.52
TRP1YDR007W XBP1P40489 647 aa5.53□□□□□ -1.52
TRP1YDR007W SER33P40510 469 aa5.53□□□□□ -1.52
TRP1YDR007W FMP33P46998 180 aa5.53□□□□□ -1.52
TRP1YDR007W APS3P47064 194 aa5.53□□□□□ -1.52
TRP1YDR007W PIB2P53191 635 aa5.53□□□□□ -1.52
TRP1YDR007W RPL15BP54780 204 aaPredicted RBP5.53□□□□□ -1.52
TRP1YDR007W RIM13Q03792 727 aa5.53□□□□□ -1.52
TRP1YDR007W YDR387CQ04162 555 aa5.53□□□□□ -1.52
TRP1YDR007W COQ11Q05892 277 aa5.53□□□□□ -1.52
TRP1YDR007W SOR2Q07786 357 aa5.53□□□□□ -1.52
TRP1YDR007W THI20Q08224 551 aa5.53□□□□□ -1.52
TRP1YDR007W BSC1Q12140 328 aa5.53□□□□□ -1.52
TRP1YDR007W MED4Q12343 284 aa5.53□□□□□ -1.52
TRP1YDR007W NDJ1Q12366 352 aa5.53□□□□□ -1.52
TRP1YDR007W EMP46Q12396 444 aa5.53□□□□□ -1.52
TRP1YDR007W TFB5Q3E7C1 72 aaPredicted RBP5.53□□□□□ -1.52
TRP1YDR007W URB1P34241 1764 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W DAP2P18962 818 aa5.52□□□□□ -1.53
TRP1YDR007W AIM17P23180 465 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W RPI1P23250 407 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W BUB3P26449 341 aa5.52□□□□□ -1.53
TRP1YDR007W RAD24P32641 659 aa5.52□□□□□ -1.53
TRP1YDR007W YNK1P36010 153 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W PCA1P38360 1216 aa5.52□□□□□ -1.53
TRP1YDR007W RCK2P38623 610 aa5.52□□□□□ -1.53
TRP1YDR007W MLH1P38920 769 aa5.52□□□□□ -1.53
TRP1YDR007W PCL6P40038 420 aa5.52□□□□□ -1.53
TRP1YDR007W PAC11P40960 533 aa5.52□□□□□ -1.53
TRP1YDR007W MRM2P53123 320 aa5.52□□□□□ -1.53
TRP1YDR007W EFM5P53200 248 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W RTC4P53850 401 aa5.52□□□□□ -1.53
TRP1YDR007W IMP4P53941 290 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W MMT1Q03218 510 aa5.52□□□□□ -1.53
TRP1YDR007W DBP9Q06218 594 aaKnown RBP5.52□□□□□ -1.53
TRP1YDR007W ARR2Q06597 130 aa5.52□□□□□ -1.53
TRP1YDR007W YOR289WQ12012 251 aaPredicted RBP5.52□□□□□ -1.53
TRP1YDR007W RKM5Q12367 367 aa5.52□□□□□ -1.53
TRP1YDR007W YIL002W-AQ3E7Z5 69 aa5.52□□□□□ -1.53
TRP1YDR007W EXO70P19658 623 aa5.51□□□□□ -1.53
TRP1YDR007W SEC62P21825 274 aa5.51□□□□□ -1.53
TRP1YDR007W ACH1P32316 526 aa5.51□□□□□ -1.53
TRP1YDR007W GCG1P32656 232 aaKnown RBP5.51□□□□□ -1.53
TRP1YDR007W CUE2P36075 443 aaKnown RBP5.51□□□□□ -1.53
TRP1YDR007W YBR062CP38239 180 aa5.51□□□□□ -1.53
TRP1YDR007W SMC2P38989 1170 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms