RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W KAP104P38217 918 aaKnown RBP1.99□□□□□ -2.09
CDC50YCR094W MST28P39552 234 aa1.99□□□□□ -2.09
CDC50YCR094W SSO2P39926 295 aa1.99□□□□□ -2.09
CDC50YCR094W RTT105P40063 208 aa1.99□□□□□ -2.09
CDC50YCR094W LCP5P40079 357 aaPredicted RBP1.99□□□□□ -2.09
CDC50YCR094W ABM1P47146 123 aa1.99□□□□□ -2.09
CDC50YCR094W RET3P53600 189 aa1.99□□□□□ -2.09
CDC50YCR094W WSC2P53832 503 aa1.99□□□□□ -2.09
CDC50YCR094W RNY1Q02933 434 aaKnown RBP1.99□□□□□ -2.09
CDC50YCR094W MRP51Q02950 344 aa1.99□□□□□ -2.09
CDC50YCR094W MMT1Q03218 510 aa1.99□□□□□ -2.09
CDC50YCR094W ASA1Q06822 443 aa1.99□□□□□ -2.09
CDC50YCR094W PEX27Q08580 376 aa1.99□□□□□ -2.09
CDC50YCR094W TEF1P02994 458 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W ARG4P04076 463 aaPredicted RBP1.98□□□□□ -2.09
CDC50YCR094W CDC37P06101 506 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W SAM1P10659 382 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W GAL3P13045 520 aa1.98□□□□□ -2.09
CDC50YCR094W SAM2P19358 384 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W HXT2P23585 541 aa1.98□□□□□ -2.09
CDC50YCR094W DBR1P24309 405 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W DAL80P26343 269 aa1.98□□□□□ -2.09
CDC50YCR094W MSK1P32048 576 aa1.98□□□□□ -2.09
CDC50YCR094W RRP1P35178 278 aaPredicted RBP1.98□□□□□ -2.09
CDC50YCR094W SHO1P40073 367 aa1.98□□□□□ -2.09
CDC50YCR094W MMF1P40185 145 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W AIM20P40451 204 aa1.98□□□□□ -2.09
CDC50YCR094W GCD14P46959 383 aaPredicted RBP1.98□□□□□ -2.09
CDC50YCR094W POP6P53218 158 aa1.98□□□□□ -2.09
CDC50YCR094W RRP46P53256 223 aaPredicted RBP1.98□□□□□ -2.09
CDC50YCR094W MSO1P53604 210 aaKnown RBP1.98□□□□□ -2.09
CDC50YCR094W BET5Q03630 159 aa1.98□□□□□ -2.09
CDC50YCR094W AIM33Q04516 312 aa1.98□□□□□ -2.09
CDC50YCR094W ECM18Q04623 453 aa1.98□□□□□ -2.09
CDC50YCR094W REX4Q08237 289 aa1.98□□□□□ -2.09
CDC50YCR094W TIM18Q08749 192 aa1.98□□□□□ -2.09
CDC50YCR094W RAD61Q99359 647 aa1.98□□□□□ -2.09
CDC50YCR094W SSC1P0CS90 654 aaKnown RBP1.97□□□□□ -2.09
CDC50YCR094W MAS1P10507 462 aa1.97□□□□□ -2.09
CDC50YCR094W GCD2P12754 651 aaPredicted RBP1.97□□□□□ -2.09
CDC50YCR094W OM45P16547 393 aa1.97□□□□□ -2.09
CDC50YCR094W SLM5P25345 492 aaKnown RBP1.97□□□□□ -2.09
CDC50YCR094W PET18P25362 215 aa1.97□□□□□ -2.09
CDC50YCR094W PUT3P25502 979 aaPredicted RBP1.97□□□□□ -2.09
CDC50YCR094W DEG1P31115 442 aaKnown RBP1.97□□□□□ -2.09
CDC50YCR094W ZUO1P32527 433 aaKnown RBP1.97□□□□□ -2.09
CDC50YCR094W VAM7P32912 316 aa1.97□□□□□ -2.09
CDC50YCR094W SPT10P35208 640 aa1.97□□□□□ -2.09
CDC50YCR094W RSM22P36056 628 aa1.97□□□□□ -2.09
CDC50YCR094W PMU1P36069 295 aa1.97□□□□□ -2.09
CDC50YCR094W YBR056WP38081 501 aa1.97□□□□□ -2.09
CDC50YCR094W SWD3P38123 315 aa1.97□□□□□ -2.09
CDC50YCR094W ALP1P38971 573 aa1.97□□□□□ -2.09
CDC50YCR094W MNN9P39107 395 aaKnown RBP1.97□□□□□ -2.09
CDC50YCR094W ALG8P40351 577 aa1.97□□□□□ -2.09
CDC50YCR094W YGR210CP42942 411 aa1.97□□□□□ -2.09
CDC50YCR094W LAM5P43560 674 aa1.97□□□□□ -2.09
CDC50YCR094W YFR018CP43599 363 aa1.97□□□□□ -2.09
CDC50YCR094W TOS3P43637 560 aa1.97□□□□□ -2.09
CDC50YCR094W AIP1P46680 615 aaKnown RBP1.97□□□□□ -2.09
CDC50YCR094W AZR1P50080 613 aa1.97□□□□□ -2.09
CDC50YCR094W RPN14P53196 417 aa1.97□□□□□ -2.09
CDC50YCR094W ARP5P53946 755 aa1.97□□□□□ -2.09
CDC50YCR094W PIR3Q03180 325 aa1.97□□□□□ -2.09
CDC50YCR094W YMR310CQ04867 317 aaPredicted RBP1.97□□□□□ -2.09
CDC50YCR094W LDS2Q08218 356 aa1.97□□□□□ -2.09
CDC50YCR094W HRT3Q12347 344 aa1.97□□□□□ -2.09
CDC50YCR094W SPO24Q3E752 67 aa1.97□□□□□ -2.09
CDC50YCR094W PAB1P04147 577 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
CDC50YCR094W RNR2P09938 399 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W ARF1P11076 181 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W ATR1P13090 542 aa1.96□□□□□ -2.1
CDC50YCR094W CAP2P13517 287 aa1.96□□□□□ -2.1
CDC50YCR094W PUT4P15380 627 aa1.96□□□□□ -2.1
CDC50YCR094W MSS116P15424 664 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W FAR1P21268 830 aa1.96□□□□□ -2.1
CDC50YCR094W EXG1P23776 448 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W HMX1P32339 317 aa1.96□□□□□ -2.1
CDC50YCR094W KKQ8P36004 724 aa1.96□□□□□ -2.1
CDC50YCR094W ATP3P38077 311 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W MIX23P38162 196 aa1.96□□□□□ -2.1
CDC50YCR094W ATM1P40416 690 aa1.96□□□□□ -2.1
CDC50YCR094W SFH5P47008 294 aa1.96□□□□□ -2.1
CDC50YCR094W RIB4P50861 169 aaPredicted RBP1.96□□□□□ -2.1
CDC50YCR094W YGR117CP53270 476 aa1.96□□□□□ -2.1
CDC50YCR094W DBP6P53734 629 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W HXT11P54862 567 aa1.96□□□□□ -2.1
CDC50YCR094W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
CDC50YCR094W YMR181CQ03231 154 aa1.96□□□□□ -2.1
CDC50YCR094W BCH1Q05029 724 aa1.96□□□□□ -2.1
CDC50YCR094W RAX1Q08760 435 aa1.96□□□□□ -2.1
CDC50YCR094W TPT1Q12272 230 aaKnown RBP1.96□□□□□ -2.1
CDC50YCR094W NCA2Q12374 616 aa1.96□□□□□ -2.1
CDC50YCR094W FSH3Q99369 266 aa1.96□□□□□ -2.1
CDC50YCR094W TPK3P05986 398 aa1.95□□□□□ -2.1
CDC50YCR094W ATP1P07251 545 aaKnown RBP1.95□□□□□ -2.1
CDC50YCR094W MAS2P11914 482 aa1.95□□□□□ -2.1
CDC50YCR094W CKI1P20485 582 aa1.95□□□□□ -2.1
CDC50YCR094W SLY1P22213 666 aa1.95□□□□□ -2.1
CDC50YCR094W YPS1P32329 569 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms