RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	DXO1	Q06349	442 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	YDL114W	Q07530	308 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	TEN1	Q07921	160 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	ASP3-2	P0CX77	362 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	ASP3-3	P0CX78	362 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	ASP3-4	P0CX79	362 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	ASP3-1	P0CZ17	362 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	ERG9	P29704	444 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	MET22	P32179	357 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	VPS51	P36116	164 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	YER130C	P39959	443 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	YPS6	P40583	537 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	CSM4	Q08955	156 aa		6.61	□□□□□ -1.35
UBP13	YBL067C	PGK1	P00560	416 aa	Known RBP	6.6	□□□□□ -1.35
UBP13	YBL067C	HTB1	P02293	131 aa	Known RBP	6.6	□□□□□ -1.35
UBP13	YBL067C	HTB2	P02294	131 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	CLN3	P13365	580 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	YMR31	P19955	123 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	PDE1	P22434	369 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	RBK1	P25332	333 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	APL1	P27351	700 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	CDC5	P32562	705 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	RFC5	P38251	354 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	URM1	P40554	99 aa	Predicted RBP	6.6	□□□□□ -1.35
UBP13	YBL067C	HOC1	P47124	396 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	EBS1	Q03466	884 aa	Known RBP	6.6	□□□□□ -1.35
UBP13	YBL067C	ASR1	Q06834	288 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	OPI3	P05375	206 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	PEP4	P07267	405 aa	Known RBP	6.6	□□□□□ -1.35
UBP13	YBL067C	CHO1	P08456	276 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	ATP10	P18496	279 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	GAC1	P28006	793 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	ACO2	P39533	789 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	RPH1	P39956	796 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	LCP5	P40079	357 aa	Predicted RBP	6.6	□□□□□ -1.35
UBP13	YBL067C	JLP2	P40206	208 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	YER175W-A	Q8TGU4	54 aa		6.6	□□□□□ -1.35
UBP13	YBL067C	YOX1	P34161	385 aa		6.59	□□□□□ -1.35
UBP13	YBL067C	YPT10	P38146	199 aa		6.59	□□□□□ -1.35
UBP13	YBL067C	VHC1	P38329	1120 aa		6.59	□□□□□ -1.35
UBP13	YBL067C	TSC10	P38342	320 aa		6.59	□□□□□ -1.35
UBP13	YBL067C	YER137C	P40083	148 aa	Known RBP	6.59	□□□□□ -1.35
UBP13	YBL067C	YDL242W	Q07746	117 aa		6.59	□□□□□ -1.35
UBP13	YBL067C	WHI2	P12611	486 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	FPS1	P23900	669 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	PRP21	P32524	280 aa	Predicted RBP	6.58	□□□□□ -1.36
UBP13	YBL067C	ECM25	P32525	599 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	YKL097C	P34245	136 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	HIS2	P38635	335 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	PHO86	P46956	311 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	YTP1	P53584	459 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	ZRG17	P53735	605 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	IZH3	Q07959	543 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	MAS2	P11914	482 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	POX1	P13711	748 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	MSK1	P32048	576 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	ICP55	P40051	511 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	LYS5	P50113	272 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	GND2	P53319	492 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	MPS1	P54199	764 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	YDR248C	Q03786	193 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	ARO10	Q06408	635 aa		6.58	□□□□□ -1.36
UBP13	YBL067C	YLL053C	P0CD98	152 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	INM1	P38710	295 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	YER184C	P39961	794 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	CUZ1	P53899	274 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	RRI1	Q12468	440 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	FSH3	Q99369	266 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	RPL12A	P0CX53	165 aa	Known RBP	6.57	□□□□□ -1.36
UBP13	YBL067C	RPL12B	P0CX54	165 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	SNF3	P10870	884 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	MXR2	P25566	168 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	CSE1	P33307	960 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	LHS1	P36016	881 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	PAC11	P40960	533 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	AMA1	P50082	593 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	PKP2	P53170	491 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	OST6	Q03723	332 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	CAC2	Q04199	468 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	ARP6	Q12509	438 aa		6.57	□□□□□ -1.36
UBP13	YBL067C	NOT5	Q12514	560 aa	Predicted RBP	6.57	□□□□□ -1.36
UBP13	YBL067C	CHO2	P05374	869 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	PDR3	P33200	976 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	RPL32	P38061	130 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	RRN10	P38204	145 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	ANS1	P38832	159 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	RPN11	P43588	306 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	SNX4	P47057	423 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	NBP1	P52919	319 aa	Predicted RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	NBP35	P52920	328 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	RCF2	P53721	224 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	TY1A-NL1	Q12391	440 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	YPR1	Q12458	312 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	MES1	P00958	751 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	NDC1	P32500	655 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	OSH3	P38713	996 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	SAS2	P40963	338 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	SEC13	Q04491	297 aa	Known RBP	6.56	□□□□□ -1.36
UBP13	YBL067C	YDR109C	Q04585	715 aa		6.56	□□□□□ -1.36
UBP13	YBL067C	CDA2	Q06703	312 aa		6.56	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms