RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W TY1A-MR1Q04215 440 aa5.35□□□□□ -1.55
SHP1YBL058W YDR124WQ04608 324 aa5.35□□□□□ -1.55
SHP1YBL058W RPN5Q12250 445 aaKnown RBP5.35□□□□□ -1.55
SHP1YBL058W MTR10Q99189 972 aa5.35□□□□□ -1.55
SHP1YBL058W TAD3Q9URQ3 322 aa5.35□□□□□ -1.55
SHP1YBL058W Q0144Q9ZZW2 109 aa5.35□□□□□ -1.55
SHP1YBL058W CBP2P03874 630 aaPredicted RBP5.34□□□□□ -1.55
SHP1YBL058W SPS100P13130 326 aa5.34□□□□□ -1.55
SHP1YBL058W ERD1P16151 362 aa5.34□□□□□ -1.55
SHP1YBL058W RPB5P20434 215 aa5.34□□□□□ -1.55
SHP1YBL058W MCK1P21965 375 aaKnown RBP5.34□□□□□ -1.55
SHP1YBL058W GAS1P22146 559 aaKnown RBP5.34□□□□□ -1.55
SHP1YBL058W CAT2P32796 670 aaKnown RBP5.34□□□□□ -1.55
SHP1YBL058W LOT5P34234 306 aa5.34□□□□□ -1.55
SHP1YBL058W PGU1P47180 361 aa5.34□□□□□ -1.55
SHP1YBL058W IDP3P53982 420 aaKnown RBP5.34□□□□□ -1.55
SHP1YBL058W ECM11Q04110 302 aa5.34□□□□□ -1.55
SHP1YBL058W DCR2Q05924 578 aa5.34□□□□□ -1.55
SHP1YBL058W FDH1Q08911 376 aa5.34□□□□□ -1.55
SHP1YBL058W SPE4Q12455 300 aa5.34□□□□□ -1.55
SHP1YBL058W PSF1Q12488 208 aa5.34□□□□□ -1.55
SHP1YBL058W SKS1Q12505 502 aa5.34□□□□□ -1.55
SHP1YBL058W SFG1Q12507 346 aa5.34□□□□□ -1.55
SHP1YBL058W YPR096CO13587 100 aa5.33□□□□□ -1.56
SHP1YBL058W CAR2P07991 424 aaKnown RBP5.33□□□□□ -1.56
SHP1YBL058W ARF1P11076 181 aaKnown RBP5.33□□□□□ -1.56
SHP1YBL058W REC107P21651 314 aa5.33□□□□□ -1.56
SHP1YBL058W STE14P32584 239 aa5.33□□□□□ -1.56
SHP1YBL058W SEC17P32602 292 aa5.33□□□□□ -1.56
SHP1YBL058W LOS1P33418 1100 aaPredicted RBP5.33□□□□□ -1.56
SHP1YBL058W TPO5P36029 618 aa5.33□□□□□ -1.56
SHP1YBL058W RSM22P36056 628 aa5.33□□□□□ -1.56
SHP1YBL058W CAF4P36130 643 aa5.33□□□□□ -1.56
SHP1YBL058W YKR073CP36153 106 aa5.33□□□□□ -1.56
SHP1YBL058W YMR262WP38430 313 aa5.33□□□□□ -1.56
SHP1YBL058W AST2P39945 430 aaKnown RBP5.33□□□□□ -1.56
SHP1YBL058W ZRG8P40021 1076 aa5.33□□□□□ -1.56
SHP1YBL058W GTO1P48239 356 aa5.33□□□□□ -1.56
SHP1YBL058W RPM2Q02773 1202 aa5.33□□□□□ -1.56
SHP1YBL058W PLB2Q03674 706 aa5.33□□□□□ -1.56
SHP1YBL058W GMC2Q06201 188 aa5.33□□□□□ -1.56
SHP1YBL058W VPS74Q06385 345 aa5.33□□□□□ -1.56
SHP1YBL058W BAR1P12630 587 aa5.32□□□□□ -1.56
SHP1YBL058W MEF1P25039 761 aa5.32□□□□□ -1.56
SHP1YBL058W AAR2P32357 355 aaPredicted RBP5.32□□□□□ -1.56
SHP1YBL058W RPT5P33297 434 aaKnown RBP5.32□□□□□ -1.56
SHP1YBL058W YKL077WP36081 392 aa5.32□□□□□ -1.56
SHP1YBL058W MAL32P38158 584 aa5.32□□□□□ -1.56
SHP1YBL058W STP2P38704 541 aa5.32□□□□□ -1.56
SHP1YBL058W BZZ1P38822 633 aa5.32□□□□□ -1.56
SHP1YBL058W RPS12P48589 143 aaKnown RBP5.32□□□□□ -1.56
SHP1YBL058W KEL2P50090 882 aa5.32□□□□□ -1.56
SHP1YBL058W MKC7P53379 596 aa5.32□□□□□ -1.56
SHP1YBL058W TVP15Q03860 143 aa5.32□□□□□ -1.56
SHP1YBL058W ERB1Q04660 807 aaKnown RBP5.32□□□□□ -1.56
SHP1YBL058W YMR310CQ04867 317 aaPredicted RBP5.32□□□□□ -1.56
SHP1YBL058W PAL1Q05518 499 aaKnown RBP5.32□□□□□ -1.56
SHP1YBL058W CRR1Q05790 422 aa5.32□□□□□ -1.56
SHP1YBL058W FAR10Q06001 478 aa5.32□□□□□ -1.56
SHP1YBL058W HDA2Q06629 674 aa5.32□□□□□ -1.56
SHP1YBL058W RRG7Q08774 242 aaPredicted RBP5.32□□□□□ -1.56
SHP1YBL058W RDR1Q08904 546 aa5.32□□□□□ -1.56
SHP1YBL058W ATG34Q12292 412 aa5.32□□□□□ -1.56
SHP1YBL058W ATP4P05626 244 aa5.31□□□□□ -1.56
SHP1YBL058W NCP1P16603 691 aaKnown RBP5.31□□□□□ -1.56
SHP1YBL058W DBR1P24309 405 aaKnown RBP5.31□□□□□ -1.56
SHP1YBL058W YIM1P28625 365 aa5.31□□□□□ -1.56
SHP1YBL058W PTC1P35182 281 aa5.31□□□□□ -1.56
SHP1YBL058W TUL1P36096 758 aa5.31□□□□□ -1.56
SHP1YBL058W SCO2P38072 301 aa5.31□□□□□ -1.56
SHP1YBL058W YBL029WP38201 376 aa5.31□□□□□ -1.56
SHP1YBL058W APD1P38281 316 aa5.31□□□□□ -1.56
SHP1YBL058W YHR177WP38867 453 aa5.31□□□□□ -1.56
SHP1YBL058W YEN1P40028 759 aa5.31□□□□□ -1.56
SHP1YBL058W JEM1P40358 645 aa5.31□□□□□ -1.56
SHP1YBL058W LYS12P40495 371 aaKnown RBP5.31□□□□□ -1.56
SHP1YBL058W SEC26P41810 973 aaKnown RBP5.31□□□□□ -1.56
SHP1YBL058W PRY1P47032 299 aa5.31□□□□□ -1.56
SHP1YBL058W YNL010WP53981 241 aaKnown RBP5.31□□□□□ -1.56
SHP1YBL058W INP1Q03694 420 aa5.31□□□□□ -1.56
SHP1YBL058W GLO2Q05584 274 aa5.31□□□□□ -1.56
SHP1YBL058W HRI1Q05905 244 aaKnown RBP5.31□□□□□ -1.56
SHP1YBL058W YEH2Q07950 538 aa5.31□□□□□ -1.56
SHP1YBL058W UAF30Q08747 228 aa5.31□□□□□ -1.56
SHP1YBL058W JLP1Q12358 412 aa5.31□□□□□ -1.56
SHP1YBL058W RAS2P01120 322 aaKnown RBP5.3□□□□□ -1.56
SHP1YBL058W GPH1P06738 902 aaKnown RBP5.3□□□□□ -1.56
SHP1YBL058W ADE5,7P07244 802 aaKnown RBP5.3□□□□□ -1.56
SHP1YBL058W YMR085WP0CF18 432 aa5.3□□□□□ -1.56
SHP1YBL058W YHR214C-DP0CX93 97 aa5.3□□□□□ -1.56
SHP1YBL058W CTA1P15202 515 aa5.3□□□□□ -1.56
SHP1YBL058W MTR2P34232 184 aaKnown RBP5.3□□□□□ -1.56
SHP1YBL058W YBR032WP38223 100 aa5.3□□□□□ -1.56
SHP1YBL058W YMR144WP40214 342 aaKnown RBP5.3□□□□□ -1.56
SHP1YBL058W RIC1P40395 1056 aa5.3□□□□□ -1.56
SHP1YBL058W UBC9P50623 157 aaPredicted RBP5.3□□□□□ -1.56
SHP1YBL058W TAF6P53040 516 aa5.3□□□□□ -1.56
SHP1YBL058W REX2P54964 269 aaKnown RBP5.3□□□□□ -1.56
SHP1YBL058W YLR036CQ07986 203 aa5.3□□□□□ -1.56
SHP1YBL058W GPN2Q08726 347 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms