RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YDR262WQ12331 272 aa1.96□□□□□ -2.1
SNC1YAL030W NCA2Q12374 616 aa1.96□□□□□ -2.1
SNC1YAL030W YOP1Q12402 180 aa1.96□□□□□ -2.1
SNC1YAL030W RRP36Q12481 300 aaPredicted RBP1.96□□□□□ -2.1
SNC1YAL030W SET6Q12529 373 aa1.96□□□□□ -2.1
SNC1YAL030W FSH3Q99369 266 aa1.96□□□□□ -2.1
SNC1YAL030W VPS63O13549 108 aa1.95□□□□□ -2.1
SNC1YAL030W SUP35P05453 685 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W RPS16AP0CX51 143 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W RPS16BP0CX52 143 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W CAP2P13517 287 aa1.95□□□□□ -2.1
SNC1YAL030W HXT2P23585 541 aa1.95□□□□□ -2.1
SNC1YAL030W MNS1P32906 549 aa1.95□□□□□ -2.1
SNC1YAL030W RIB7P33312 244 aa1.95□□□□□ -2.1
SNC1YAL030W YKL097CP34245 136 aa1.95□□□□□ -2.1
SNC1YAL030W PTK1P36002 662 aaPredicted RBP1.95□□□□□ -2.1
SNC1YAL030W RIB5P38145 238 aa1.95□□□□□ -2.1
SNC1YAL030W CHK1P38147 527 aa1.95□□□□□ -2.1
SNC1YAL030W PEX32P38292 413 aa1.95□□□□□ -2.1
SNC1YAL030W MTC6P38849 526 aa1.95□□□□□ -2.1
SNC1YAL030W MDM31P38880 579 aa1.95□□□□□ -2.1
SNC1YAL030W ALP1P38971 573 aa1.95□□□□□ -2.1
SNC1YAL030W RPH1P39956 796 aa1.95□□□□□ -2.1
SNC1YAL030W JLP2P40206 208 aa1.95□□□□□ -2.1
SNC1YAL030W YJL213WP40896 331 aa1.95□□□□□ -2.1
SNC1YAL030W CDC40P40968 455 aaPredicted RBP1.95□□□□□ -2.1
SNC1YAL030W OST1P41543 476 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W YFR016CP43597 1233 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W YFR018CP43599 363 aa1.95□□□□□ -2.1
SNC1YAL030W YHC3P47040 408 aa1.95□□□□□ -2.1
SNC1YAL030W MSO1P53604 210 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SNC1YAL030W YLR297WQ05899 129 aa1.95□□□□□ -2.1
SNC1YAL030W RRG8Q06109 277 aa1.95□□□□□ -2.1
SNC1YAL030W MDM36Q06820 579 aa1.95□□□□□ -2.1
SNC1YAL030W NDE2Q07500 545 aa1.95□□□□□ -2.1
SNC1YAL030W SNX3Q08826 162 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W THP3Q12049 470 aaKnown RBP1.95□□□□□ -2.1
SNC1YAL030W YOR012WQ12351 137 aa1.95□□□□□ -2.1
SNC1YAL030W PFK27Q12471 397 aaPredicted RBP1.95□□□□□ -2.1
SNC1YAL030W RGS2Q99188 309 aa1.95□□□□□ -2.1
SNC1YAL030W OM45P16547 393 aa1.94□□□□□ -2.1
SNC1YAL030W HEM15P16622 393 aa1.94□□□□□ -2.1
SNC1YAL030W SLY1P22213 666 aa1.94□□□□□ -2.1
SNC1YAL030W EXG1P23776 448 aaKnown RBP1.94□□□□□ -2.1
SNC1YAL030W PHA2P32452 334 aa1.94□□□□□ -2.1
SNC1YAL030W MUD1P32605 298 aaKnown RBP1.94□□□□□ -2.1
SNC1YAL030W NAT2P37293 288 aa1.94□□□□□ -2.1
SNC1YAL030W YHR131CP38835 850 aa1.94□□□□□ -2.1
SNC1YAL030W COX14P39103 70 aa1.94□□□□□ -2.1
SNC1YAL030W PRP39P39682 629 aaKnown RBP1.94□□□□□ -2.1
SNC1YAL030W AIM20P40451 204 aa1.94□□□□□ -2.1
SNC1YAL030W SAD1P43589 448 aa1.94□□□□□ -2.1
SNC1YAL030W RPN14P53196 417 aa1.94□□□□□ -2.1
SNC1YAL030W LSC1P53598 329 aaKnown RBP1.94□□□□□ -2.1
SNC1YAL030W SPR6Q01684 191 aa1.94□□□□□ -2.1
SNC1YAL030W ABZ2Q03266 374 aa1.94□□□□□ -2.1
SNC1YAL030W CCE1Q03702 353 aa1.94□□□□□ -2.1
SNC1YAL030W AIM33Q04516 312 aa1.94□□□□□ -2.1
SNC1YAL030W ECM18Q04623 453 aa1.94□□□□□ -2.1
SNC1YAL030W CUR1Q06469 252 aa1.94□□□□□ -2.1
SNC1YAL030W YOL075CQ08234 1294 aa1.94□□□□□ -2.1
SNC1YAL030W HNT3Q08702 217 aa1.94□□□□□ -2.1
SNC1YAL030W AFT2Q08957 416 aa1.94□□□□□ -2.1
SNC1YAL030W GLE1Q12315 538 aa1.94□□□□□ -2.1
SNC1YAL030W DCP1Q12517 231 aaPredicted RBP1.94□□□□□ -2.1
SNC1YAL030W SPO24Q3E752 67 aa1.94□□□□□ -2.1
SNC1YAL030W MEX67Q99257 599 aaKnown RBP1.94□□□□□ -2.1
SNC1YAL030W YLL053CP0CD98 152 aa1.93□□□□□ -2.1
SNC1YAL030W SSC1P0CS90 654 aaKnown RBP1.93□□□□□ -2.1
SNC1YAL030W CPR1P14832 162 aaKnown RBP1.93□□□□□ -2.1
SNC1YAL030W CKI1P20485 582 aa1.93□□□□□ -2.1
SNC1YAL030W SAR1P20606 190 aaKnown RBP1.93□□□□□ -2.1
SNC1YAL030W FAR1P21268 830 aa1.93□□□□□ -2.1
SNC1YAL030W ERG9P29704 444 aa1.93□□□□□ -2.1
SNC1YAL030W KAR9P32526 644 aa1.93□□□□□ -2.1
SNC1YAL030W MRP4P32902 394 aa1.93□□□□□ -2.1
SNC1YAL030W PPQ1P32945 549 aa1.93□□□□□ -2.1
SNC1YAL030W MRPS5P33759 307 aa1.93□□□□□ -2.1
SNC1YAL030W GPX2P38143 162 aa1.93□□□□□ -2.1
SNC1YAL030W YBR137WP38276 179 aa1.93□□□□□ -2.1
SNC1YAL030W RTC2P38279 296 aa1.93□□□□□ -2.1
SNC1YAL030W SWC5P38326 303 aa1.93□□□□□ -2.1
SNC1YAL030W PEX18P38855 283 aa1.93□□□□□ -2.1
SNC1YAL030W PET100P38958 111 aa1.93□□□□□ -2.1
SNC1YAL030W END3P39013 349 aa1.93□□□□□ -2.1
SNC1YAL030W CCT4P39078 528 aaKnown RBP1.93□□□□□ -2.1
SNC1YAL030W IDP2P41939 412 aa1.93□□□□□ -2.1
SNC1YAL030W GCD14P46959 383 aaPredicted RBP1.93□□□□□ -2.1
SNC1YAL030W RIB4P50861 169 aaPredicted RBP1.93□□□□□ -2.1
SNC1YAL030W VOA1P53262 265 aa1.93□□□□□ -2.1
SNC1YAL030W DBP6P53734 629 aaKnown RBP1.93□□□□□ -2.1
SNC1YAL030W TRM112P53738 135 aaPredicted RBP1.93□□□□□ -2.1
SNC1YAL030W COS1P53822 381 aa1.93□□□□□ -2.1
SNC1YAL030W CRZ1P53968 678 aa1.93□□□□□ -2.1
SNC1YAL030W SPO19Q03029 223 aa1.93□□□□□ -2.1
SNC1YAL030W HER2Q03557 464 aa1.93□□□□□ -2.1
SNC1YAL030W CAB5Q03941 241 aa1.93□□□□□ -2.1
SNC1YAL030W UBX2Q04228 584 aa1.93□□□□□ -2.1
SNC1YAL030W PRM6Q04705 352 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms