RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CEP63Q96MT8 703 aa18.18■□□□□ 0.5
PHGDH-216ENST00000641375 PANX2Q96RD6 677 aa18.18■□□□□ 0.5
PHGDH-216ENST00000641375 KCTD10Q9H3F6 313 aa18.18■□□□□ 0.5
PHGDH-216ENST00000641375 RSPH10B2B2RC85 870 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 TRAF5O00463 557 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 EIF3JO75822 258 aaKnown RBP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 RGS20O76081 388 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 GNA14O95837 355 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 RSPH10BP0C881 870 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 KCNA2P16389 499 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 ZNF131P52739 623 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 ADKP55263 362 aaKnown RBP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 FKBP1BP68106 108 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 RBL2Q08999 1139 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 KNOP1Q1ED39 458 aaKnown RBP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 BMT2Q1RMZ1 405 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 NELFCDQ8IXH7 590 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 CCDC51Q96ER9 411 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 BAG1Q99933 345 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 PCDHA10Q9Y5I2 948 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 SPATA31C2B4DYI2 1134 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
PHGDH-216ENST00000641375 ARHGAP6O43182 974 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 CCNE2O96020 404 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 MYCT1Q8N699 235 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 PNMA3Q9UL41 463 aa18.17■□□□□ 0.5
PHGDH-216ENST00000641375 B4DLN1 442 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 POTEB2H3BUK9 544 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 DKC1O60832 514 aaKnown RBP eCLIP18.16■□□□□ 0.51e-16■■■■■ 39.7
PHGDH-216ENST00000641375 CNMDO75829 334 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 GYPCP04921 128 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 YWHABP31946 246 aaKnown RBP18.16■□□□□ 0.5
PHGDH-216ENST00000641375 ALDH5A1P51649 535 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-216ENST00000641375 CASP5P51878 434 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 FKBP15Q5T1M5 1219 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 UTP14CQ5TAP6 766 aaKnown RBP18.16■□□□□ 0.5
PHGDH-216ENST00000641375 GPAT2Q6NUI2 795 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 PADI6Q6TGC4 694 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 STXBP4Q6ZWJ1 553 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 GTF3C2Q8WUA4 911 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-216ENST00000641375 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
PHGDH-216ENST00000641375 NAA15Q9BXJ9 866 aaKnown RBP18.16■□□□□ 0.5
PHGDH-216ENST00000641375 TRAF3IP3Q9Y228 551 aa18.16■□□□□ 0.5
PHGDH-216ENST00000641375 CCP110O43303 1012 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 MFAP3LO75121 409 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 GCNT3O95395 438 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 ERCC3P19447 782 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 CASP14P31944 242 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 ICAM3P32942 547 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 GJA5P36382 358 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 CNTN2Q02246 1040 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 GOLGA8FQ08AF8 430 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 GOLGA8DPQ0D2H9 430 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 TBC1D8BQ0IIM8 1120 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 MAN2A1Q16706 1144 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 MIIPQ5JXC2 388 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 TMEM139Q8IV31 216 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 CCAR2Q8N163 923 aaKnown RBP18.15■□□□□ 0.5
PHGDH-216ENST00000641375 MPHOSPH6Q99547 160 aaKnown RBP18.15■□□□□ 0.5
PHGDH-216ENST00000641375 JPH1Q9HDC5 661 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-216ENST00000641375 RBPJLQ9UBG7 517 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 PDXKO00764 312 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 PEX10O60683 326 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 RARRES1P49788 294 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 CEP135Q66GS9 1140 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 ZC3H3Q8IXZ2 948 aaKnown RBP18.15■□□□□ 0.5
PHGDH-216ENST00000641375 CPLX3Q8WVH0 158 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 TIPINQ9BVW5 301 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 SLC9A2Q9UBY0 812 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 UBE4BO95155 1302 aa18.15■□□□□ 0.5
PHGDH-216ENST00000641375 CALUO43852 315 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-216ENST00000641375 PSAPP07602 524 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 MYBP10242 640 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 VWA3BQ502W6 1294 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 FAM178BQ8IXR5 827 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 RETREG2Q8NC44 543 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 ATP6V0A1Q93050 837 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 NUP58Q9BVL2 599 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 ANKEF1Q9NU02 776 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 SFI1A8K8P3 1242 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 CETN3O15182 167 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 MARSP56192 900 aaKnown RBP18.14■□□□□ 0.49
PHGDH-216ENST00000641375 ADAM9Q13443 819 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 FAM133AQ8N9E0 248 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 IQCDQ96DY2 449 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 NDST4Q9H3R1 872 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 DOCK5Q9H7D0 1870 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.49
PHGDH-216ENST00000641375 ASTN1O14525 1302 aa18.14■□□□□ 0.49
PHGDH-216ENST00000641375 PRPF6O94906 941 aaKnown RBP18.13■□□□□ 0.49
PHGDH-216ENST00000641375 CETPP11597 493 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 EDNRBP24530 442 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 GTF2A2P52657 109 aa18.13■□□□□ 0.49
PHGDH-216ENST00000641375 CCDC40Q4G0X9 1142 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms