RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 IL25Q9H293 177 aa6.34□□□□□ -1.39
PDE4D-229ENST00000638939 RWDD1Q9H446 243 aaPredicted RBP6.34□□□□□ -1.39
PDE4D-229ENST00000638939 NSUN3Q9H649 340 aaKnown RBP6.34□□□□□ -1.39
PDE4D-229ENST00000638939 RC3H2Q9HBD1 1191 aaKnown RBP6.34□□□□□ -1.39
PDE4D-229ENST00000638939 VAT1LQ9HCJ6 419 aa6.34□□□□□ -1.39
PDE4D-229ENST00000638939 SCUBE2Q9NQ36 999 aa6.34□□□□□ -1.39
PDE4D-229ENST00000638939 RWDD3Q9Y3V2 267 aa6.34□□□□□ -1.39
PDE4D-229ENST00000638939 PLXNA3P51805 1871 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 ERICH2A1L162 156 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 FAM86C2PA6NEL3 165 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 SPATA31C2B4DYI2 1134 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 NCK2O43639 380 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 DDAH1O94760 285 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 MMP1P03956 469 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 RPLP2P05387 115 aaKnown RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 CYP21A2P08686 494 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 CTSHP09668 335 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 HOXB3P14651 431 aaPredicted RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 ZP2Q05996 745 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 MGAT3Q09327 533 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 GPM6BQ13491 265 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 SART3Q15020 963 aaKnown RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 CTC1Q2NKJ3 1217 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 TAF2Q6P1X5 1199 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 TRIM50Q86XT4 487 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 TMEM192Q8IY95 271 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 CLP1Q92989 425 aaKnown RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 GPRASP2Q96D09 838 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 PIGSQ96S52 555 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 POP1Q99575 1024 aaKnown RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
PDE4D-229ENST00000638939 PRR14Q9BWN1 585 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 RNPEPQ9H4A4 650 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 EHMT1Q9H9B1 1298 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 LHX6Q9UPM6 363 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 C2orf16Q68DN1 1984 aa6.33□□□□□ -1.4
PDE4D-229ENST00000638939 SPTBN4Q9H254 2564 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 MYO10Q9HD67 2058 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 DMDP11532 3685 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 MBLAC1A4D2B0 266 aaPredicted RBP6.32□□□□□ -1.4
PDE4D-229ENST00000638939 POM121CA8CG34 1229 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 H3BQ06 376 aaPredicted RBP6.32□□□□□ -1.4
PDE4D-229ENST00000638939 IFIT3O14879 490 aaKnown RBP6.32□□□□□ -1.4
PDE4D-229ENST00000638939 DCXO43602 365 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 SORBS3O60504 671 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 RB1P06400 928 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 GSPT1P15170 499 aaKnown RBP6.32□□□□□ -1.4
PDE4D-229ENST00000638939 KCNA2P16389 499 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 SMARCA1P28370 1054 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 CTNNB1P35222 781 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 ARHGAP4P98171 946 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 WTAPQ15007 396 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 TCEAL5Q5H9L2 206 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 TTC22Q5TAA0 569 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 TSHZ1Q6ZSZ6 1077 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 CYFIP1Q7L576 1253 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 CATIPQ7Z7H3 387 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
PDE4D-229ENST00000638939 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 TEX2Q8IWB9 1127 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 ADHFE1Q8IWW8 467 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 RUFY2Q8WXA3 655 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 ZNF689Q96CS4 500 aaPredicted RBP6.32□□□□□ -1.4
PDE4D-229ENST00000638939 IL17RAQ96F46 866 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 CDHR1Q96JP9 859 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 PLVAPQ9BX97 442 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 OSBPL7Q9BZF2 842 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 SETD4Q9NVD3 440 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 ERAP1Q9NZ08 941 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 TUBE1Q9UJT0 475 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 SQORQ9Y6N5 450 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
PDE4D-229ENST00000638939 DCHS1Q96JQ0 3298 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 TDRD15B5MCY1 1934 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 E7EWF7 191 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 MEIS2O14770 477 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 TBX10O75333 385 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 UPP2O95045 317 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 IGHDP01880 384 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 CHRNA1P02708 482 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 GHRP10912 638 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 KIF5BP33176 963 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 TCF7P36402 384 aaPredicted RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 LTBRP36941 435 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 PPFIA1Q13136 1202 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 SMAD4Q13485 552 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 LPIN1Q14693 890 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 KMT5BQ4FZB7 885 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 FBXO47Q5MNV8 452 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 FAM43BQ6ZT52 329 aaPredicted RBP6.31□□□□□ -1.4
PDE4D-229ENST00000638939 RSPH3Q86UC2 560 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
PDE4D-229ENST00000638939 MB21D2Q8IYB1 491 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms