RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 NR3C1P04150 777 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 ITGB5P18084 799 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 MUTP22033 750 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 MAPK8IP2Q13387 824 aaPredicted RBP23.67■■□□□ 1.38
CLN6-224ENST00000638076 EPHA7Q15375 998 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 ASTE1Q2TB18 679 aaPredicted RBP23.67■■□□□ 1.38
CLN6-224ENST00000638076 TDRD12Q587J7 1177 aaKnown RBP23.67■■□□□ 1.38
CLN6-224ENST00000638076 B3GNT9Q6UX72 402 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 CLEC4DQ8WXI8 215 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 SYN2Q92777 582 aaPredicted RBP23.67■■□□□ 1.38
CLN6-224ENST00000638076 NACC1Q96RE7 527 aa23.67■■□□□ 1.38
CLN6-224ENST00000638076 SSU72P8A0A1W2PR75 194 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 AKAP3O75969 853 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 KIAA1683Q9H0B3 1180 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 PRDM10Q9NQV6 1147 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 RBBP6Q7Z6E9 1792 aaKnown RBP23.66■■□□□ 1.38
CLN6-224ENST00000638076 DDX39AO00148 427 aaKnown RBP23.66■■□□□ 1.38
CLN6-224ENST00000638076 TLR2O60603 784 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 SRGAP2O75044 1071 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 NMT1P30419 496 aaKnown RBP23.66■■□□□ 1.38
CLN6-224ENST00000638076 GFPT1Q06210 699 aaPredicted RBP23.66■■□□□ 1.38
CLN6-224ENST00000638076 SLC9C1Q4G0N8 1177 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 SMAP1Q8IYB5 467 aaPredicted RBP23.66■■□□□ 1.38
CLN6-224ENST00000638076 PARVGQ9HBI0 331 aa23.66■■□□□ 1.38
CLN6-224ENST00000638076 PPP1R1BQ9UD71 204 aaPredicted RBP23.66■■□□□ 1.38
CLN6-224ENST00000638076 CLIC2O15247 247 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 ALAS1P13196 640 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 RPL13P26373 211 aaKnown RBP23.65■■□□□ 1.38
CLN6-224ENST00000638076 SAMD7Q7Z3H4 446 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 BANK1Q8NDB2 785 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 RIT2Q99578 217 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 LXNQ9BS40 222 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 RAVER2Q9HCJ3 691 aaKnown RBP23.65■■□□□ 1.38
CLN6-224ENST00000638076 PKD2L1Q9P0L9 805 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 FRMPD4Q14CM0 1322 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 RPTORQ8N122 1335 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 FER1L6Q2WGJ9 1857 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 ANO9A1A5B4 782 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 XRCC5P13010 732 aaKnown RBP23.65■■□□□ 1.38
CLN6-224ENST00000638076 RPS12P25398 132 aaKnown RBP23.65■■□□□ 1.38
CLN6-224ENST00000638076 MAGEA1P43355 309 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 MCF2L2Q86YR7 1114 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 IL31RAQ8NI17 732 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 GANQ9H2C0 597 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 KCNH7Q9NS40 1196 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 HOMER2Q9NSB8 354 aa23.65■■□□□ 1.38
CLN6-224ENST00000638076 ASTN2O75129 1339 aaPredicted RBP23.65■■□□□ 1.38
CLN6-224ENST00000638076 POTEB2H3BUK9 544 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 EIF3DO15371 548 aaKnown RBP eCLIP23.64■■□□□ 1.38
CLN6-224ENST00000638076 CTNND1O60716 968 aaKnown RBP23.64■■□□□ 1.38
CLN6-224ENST00000638076 AFPP02771 609 aaKnown RBP23.64■■□□□ 1.38
CLN6-224ENST00000638076 SERPING1P05155 500 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 MICALL2Q8IY33 904 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 MSANTD4Q8NCY6 345 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 TRIM58Q8NG06 486 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 MLXIPQ9HAP2 919 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 SLC38A10Q9HBR0 1119 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 ARFGAP3Q9NP61 516 aa23.64■■□□□ 1.38
CLN6-224ENST00000638076 TGFB1I1O43294 461 aa23.64■■□□□ 1.37
CLN6-224ENST00000638076 RHOXF2BP0C7M4 288 aa23.64■■□□□ 1.37
CLN6-224ENST00000638076 EPB41P11171 864 aaKnown RBP23.64■■□□□ 1.37
CLN6-224ENST00000638076 BCRP11274 1271 aa23.64■■□□□ 1.37
CLN6-224ENST00000638076 CASP4P49662 377 aa23.64■■□□□ 1.37
CLN6-224ENST00000638076 ZC2HC1CQ53FD0 456 aaPredicted RBP23.64■■□□□ 1.37
CLN6-224ENST00000638076 DCAF17Q5H9S7 520 aaPredicted RBP23.64■■□□□ 1.37
CLN6-224ENST00000638076 NOA1Q8NC60 698 aaKnown RBP23.64■■□□□ 1.37
CLN6-224ENST00000638076 RHOXF2Q9BQY4 288 aa23.64■■□□□ 1.37
CLN6-224ENST00000638076 CAPN6Q9Y6Q1 641 aa23.64■■□□□ 1.37
CLN6-224ENST00000638076 CCDC151A5D8V7 595 aa23.63■■□□□ 1.37
CLN6-224ENST00000638076 SLC16A3O15427 465 aaKnown RBP23.63■■□□□ 1.37
CLN6-224ENST00000638076 TACC1O75410 805 aa23.63■■□□□ 1.37
CLN6-224ENST00000638076 FLOT1O75955 427 aa23.63■■□□□ 1.37
CLN6-224ENST00000638076 RAPGEF1Q13905 1077 aa23.63■■□□□ 1.37
CLN6-224ENST00000638076 PNKPQ96T60 521 aa23.63■■□□□ 1.37
CLN6-224ENST00000638076 METTL14Q9HCE5 456 aaKnown RBP23.63■■□□□ 1.37
CLN6-224ENST00000638076 ZMYM2Q9UBW7 1377 aa23.63■■□□□ 1.37
CLN6-224ENST00000638076 MOCS3O95396 460 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 ACTN1P12814 892 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 SLC9A1P19634 815 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 GMPSP49915 693 aaPredicted RBP23.62■■□□□ 1.37
CLN6-224ENST00000638076 MTMR2Q13614 643 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 BRD3Q15059 726 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 TBC1D10BQ4KMP7 808 aaPredicted RBP23.62■■□□□ 1.37
CLN6-224ENST00000638076 MUM1L1Q5H9M0 696 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 CAPZA3Q96KX2 299 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 IKZF4Q9H2S9 585 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 KCND2Q9NZV8 630 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 HACL1Q9UJ83 578 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 ZNF131P52739 623 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 TCERG1LQ5VWI1 586 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 FIZ1Q96SL8 496 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 MMS19Q96T76 1030 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 JADE2Q9NQC1 790 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 PCDHB13Q9Y5F0 798 aa23.62■■□□□ 1.37
CLN6-224ENST00000638076 RBAK-RBAKDNI3L0D1 243 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 PJA2O43164 708 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 ATP8B1O43520 1251 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 TBC1D8O95759 1140 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 VCAM1P19320 739 aa23.61■■□□□ 1.37
CLN6-224ENST00000638076 ARID5AQ03989 594 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms