RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 SARM1Q6SZW1 724 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 PASD1Q8IV76 773 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 AATFQ9NY61 560 aaKnown RBP eCLIP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 SEC31AO94979 1220 aaKnown RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 PSMC2P35998 433 aaKnown RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 AFPP02771 609 aaKnown RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 KCNJ6P48051 423 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 CLK1P49759 484 aaKnown RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 NDEL1Q9GZM8 345 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ABCB6Q9NP58 842 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ATAD3AQ9NVI7 634 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 NFU1Q9UMS0 254 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 C2orf54Q08AI8 447 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ARMCX4Q5H9R4 360 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 LMBR1LQ6UX01 489 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 CAPN12Q6ZSI9 719 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 CROCCP3Q8IVE0 287 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 NDUFAF2Q8N183 169 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 ZNF483Q8TF39 744 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 EME1Q96AY2 570 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-227ENST00000638011 hCG_2014768A0A024R1R8 64 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 MCUQ8NE86 351 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 LZTS1Q9Y250 596 aa16.13■□□□□ 0.17
UBE3A-227ENST00000638011 CYP2J2P51589 502 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 MESDQ14696 234 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 SCYL2Q6P3W7 929 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 TMC5Q6UXY8 1006 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 ABCC1P33527 1531 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 RFX6Q8HWS3 928 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 TTC8Q8TAM2 541 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 ADGRL1O94910 1474 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 DSG1Q02413 1049 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 OLFML2BQ68BL8 750 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 DNAJC9Q8WXX5 260 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 SNX19Q92543 992 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PHACTR3Q96KR7 559 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 DYTNA2CJ06 578 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 B4E1Z4 1266 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 RTL3Q8N8U3 475 aaKnown RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 LARP4BQ92615 738 aaKnown RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 MRPL1Q9BYD6 325 aaKnown RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 ARPP21Q9UBL0 812 aaPredicted RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PPIP5K2O43314 1243 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 MAGOHP61326 146 aaKnown RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 CENPPQ6IPU0 288 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PROM2Q8N271 834 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 RAPGEF5Q92565 580 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PA2G4Q9UQ80 394 aaKnown RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 REREQ9P2R6 1566 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PMS2P54278 862 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PICALMQ13492 652 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 CATSPER3Q86XQ3 398 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 TESK2Q96S53 571 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 ZC3H12CQ9C0D7 883 aaKnown RBP16.12■□□□□ 0.17
UBE3A-227ENST00000638011 SLITRK6Q9H5Y7 841 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 TRPC7Q9HCX4 862 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 OLFML3Q9NRN5 406 aa16.12■□□□□ 0.17
UBE3A-227ENST00000638011 PDE4DIPQ5VU43 2346 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 APOA4P06727 396 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 ZNF658Q5TYW1 1059 aaPredicted RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 DARS2Q6PI48 645 aaKnown RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 SYDE1Q6ZW31 735 aaPredicted RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 LRRC49Q8IUZ0 686 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 ADNPQ9H2P0 1102 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PFKFB2O60825 505 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 RFX1P22670 979 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PGM1P36871 562 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 MECOMQ03112 1051 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PDE5AO76074 875 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 NDUFA8P51970 172 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 SIX6OS1Q8N1H7 587 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PCYOX1LQ8NBM8 494 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PLEKHA4Q9H4M7 779 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 TMEM206Q9H813 350 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 PRR23AA6NEV1 266 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 STX7O15400 261 aaKnown RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 TMOD1P28289 359 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 DHX34Q14147 1143 aaKnown RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 EPC1Q9H2F5 836 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 SCN3BQ9NY72 215 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 CPSF3Q9UKF6 684 aaKnown RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 TK2O00142 265 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 MBD4O95243 580 aa16.11■□□□□ 0.17
UBE3A-227ENST00000638011 ATXN3P54252 364 aaPredicted RBP16.11■□□□□ 0.17
UBE3A-227ENST00000638011 SURF1Q15526 300 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms