RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ZNF317Q96PQ6 595 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 RAB34Q9BZG1 259 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 SAMD15Q9P1V8 674 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 FRMD3A2A2Y4 597 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 PPFIA2O75334 1257 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 EPS15P42566 896 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 TXKP42681 527 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 ZCWPW2Q504Y3 356 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 CYTH3O43739 400 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 MMEP08473 750 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 PEX26Q7Z412 305 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 RASGEF1CQ8N431 466 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 MDM1Q8TC05 714 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 TCP11Q8WWU5 503 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 RAD54LQ92698 747 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 DDX12PQ92771 950 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 FMO2Q99518 471 aa16.97■□□□□ 0.31
CACNA1A-235ENST00000637004 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 CACNA1SQ13698 1873 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 CYP2D6P10635 497 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 MYO1EQ12965 1108 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 SEPT2Q15019 361 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 LRRC41Q15345 812 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 ACCSLQ4AC99 568 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 PIGWQ7Z7B1 504 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 PNMA5Q96PV4 448 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 RAB17Q9H0T7 212 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 BTAF1O14981 1849 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 MYH1P12882 1939 aa16.96■□□□□ 0.31
CACNA1A-235ENST00000637004 TTI1O43156 1089 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 CLTAP09496 248 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 MARSP56192 900 aaKnown RBP16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 SYCE1Q8N0S2 351 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 SUCLA2Q9P2R7 463 aaPredicted RBP16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 PNMA2Q9UL42 364 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 C15orf41Q9Y2V0 281 aa16.96■□□□□ 0.3
CACNA1A-235ENST00000637004 SMCO2A6NFE2 343 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 PLSCR1O15162 318 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 UBE4AQ14139 1066 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 NSUN4Q96CB9 384 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 STAMBPL1Q96FJ0 436 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 PGM2Q96G03 612 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 NSRP1Q9H0G5 558 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 ATP8A1Q9Y2Q0 1164 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 CCDC169A6NNP5 214 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 GNPATO15228 680 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 CHN1P15882 459 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 PTK2Q05397 1052 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 SLC35G1Q2M3R5 365 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 TPCN2Q8NHX9 752 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 TBCKQ8TEA7 893 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
CACNA1A-235ENST00000637004 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 CAND2O75155 1236 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 FLOT1O75955 427 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 NUDT17P0C025 328 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 ANXA13P27216 316 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 PPP2R5EQ16537 467 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 CALCRLQ16602 461 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 KRT79Q5XKE5 535 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 TRPM8Q7Z2W7 1104 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 CROCCP2Q86T23 111 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 GANQ9H2C0 597 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 DPH5Q9H2P9 285 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 GOLPH3Q9H4A6 298 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 SH3BP1Q9Y3L3 701 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 PALM3A6NDB9 673 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 ANP32DO95626 131 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 ZBTB48P10074 688 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 ITGA4P13612 1032 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 MMP13P45452 471 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 MAP2K1Q02750 393 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 ZNF268Q14587 947 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 PROCA1Q8NCQ7 364 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 SPAG5Q96R06 1193 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 SELENOSQ9BQE4 189 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 TXLNGYQ9BZA5 131 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 SLC24A3Q9HC58 644 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 NOP53Q9NZM5 478 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 NAGPAQ9UK23 515 aa16.94■□□□□ 0.3
CACNA1A-235ENST00000637004 PDIA5Q14554 519 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 FAM26FQ5R3K3 315 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 SLFN11Q7Z7L1 901 aa16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 TBC1D1Q86TI0 1168 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-235ENST00000637004 SPZ1Q9BXG8 430 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms