RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HAUS3Q68CZ6 603 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 CCDC62Q6P9F0 684 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 METTL7BQ6UX53 244 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 FERMT3Q86UX7 667 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 IL31RAQ8NI17 732 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ETNPPLQ8TBG4 499 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 SLC5A5Q92911 643 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ARMC5Q96C12 935 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 GBP4Q96PP9 640 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 PYM1Q9BRP8 204 aaKnown RBP7.58□□□□□ -1.2
UPF3B-205ENST00000636792 TEKT3Q9BXF9 490 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 SPC25Q9HBM1 224 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 KCNH7Q9NS40 1196 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ZDHHC9Q9Y397 364 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 PTCH2Q9Y6C5 1203 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 MRVI1Q9Y6F6 885 aa7.58□□□□□ -1.2
UPF3B-205ENST00000636792 ARID2Q68CP9 1835 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 EMSYQ7Z589 1322 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 KDM3AQ9Y4C1 1321 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 WDR64B1ANS9 1081 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 KPNA6O60684 536 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 DUSP11O75319 330 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PSMD10O75832 226 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 TDP2O95551 362 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 GH1P01241 217 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 ZNF865P0CJ78 1059 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 RARBP10826 455 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 HOXD8P13378 290 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 KCNA2P16389 499 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PTMSP20962 102 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 MCM7P33993 719 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 LONP1P36776 959 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 CPT1AP50416 773 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 SLC26A2P50443 739 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 TOB1P50616 345 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 LAMC2Q13753 1193 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PKP1Q13835 747 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PDIA5Q14554 519 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 SF3A1Q15459 793 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 CCL14Q16627 93 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 TAPT1Q6NXT6 567 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 B3GNT9Q6UX72 402 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 FBXO16Q8IX29 292 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 TMEM87AQ8NBN3 555 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 LINC00301Q8NCQ3 95 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PPTC7Q8NI37 304 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 TNPO1Q92973 898 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PGBD1Q96JS3 809 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 MTMR9Q96QG7 549 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 ZNF577Q9BSK1 485 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 SEZ6LQ9BYH1 1024 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 UPF3AQ9H1J1 476 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 AGO4Q9HCK5 861 aaKnown RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 HMX1Q9NP08 348 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 FLRT1Q9NZU1 646 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 ZHX1Q9UKY1 873 aaPredicted RBP7.57□□□□□ -1.2
UPF3B-205ENST00000636792 PCDHB6Q9Y5E3 794 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 SCN10AQ9Y5Y9 1956 aa7.57□□□□□ -1.2
UPF3B-205ENST00000636792 GOLGA6L22H0YM25 854 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 ADAMTS3O15072 1205 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 SPTLC2O15270 562 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 MSH4O15457 936 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 SLC37A4O43826 429 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 EDIL3O43854 480 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 ZEB2O60315 1214 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 MARCH6O60337 910 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 GAS7O60861 476 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 FARP2O94887 1054 aaPredicted RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 UPP2O95045 317 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 INHAP05111 366 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 TXNP10599 105 aaKnown RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 CYP2C19P33261 490 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 TXLNAP40222 546 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 CAP1Q01518 475 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 TNFAIP2Q03169 654 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 CACNB2Q08289 660 aaPredicted RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 SEMA3FQ13275 785 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 STK38Q15208 465 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 PTPAQ15257 358 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 CCDC144BQ3MJ40 725 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 CELF3Q5SZQ8 465 aaKnown RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 C6orf118Q5T5N4 469 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 LRCH2Q5VUJ6 765 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 DTHD1Q6ZMT9 781 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 TLK2Q86UE8 772 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 IGSF22Q8N9C0 903 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 ERMNQ8TAM6 284 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 SPATA32Q96LK8 384 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 USP28Q96RU2 1077 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 KATNAL1Q9BW62 490 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 JPH1Q9HDC5 661 aaPredicted RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 PAK6Q9NQU5 681 aaPredicted RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 SLC9A2Q9UBY0 812 aa7.56□□□□□ -1.2
UPF3B-205ENST00000636792 DDX20Q9UHI6 824 aaKnown RBP7.56□□□□□ -1.2
UPF3B-205ENST00000636792 DDX41Q9UJV9 622 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms