RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TMED2Q15363 201 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 LRRC23Q53EV4 343 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 FSCBQ5H9T9 825 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 SPICE1Q8N0Z3 855 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 KLHL8Q9P2G9 620 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ZAP70P43403 619 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 MRPL28Q13084 256 aaKnown RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 PDCLQ13371 301 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 PNOCQ13519 176 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 SNCBQ16143 134 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ERFEQ4G0M1 354 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 CAPS2Q9BXY5 557 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 STN1Q9H668 368 aaKnown RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 CAPN7Q9Y6W3 813 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 PCF11O94913 1555 aaKnown RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 LAMC3Q9Y6N6 1575 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ZMYM3Q14202 1370 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 SPDYE5A6NIY4 337 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 RASSF10A6NK89 507 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ECEL1O95672 775 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 HSPA2P54652 639 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 SPDYE7PQ495Y7 208 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 AK8Q96MA6 479 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 GCOM2Q9BZD3 368 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 SLC39A2Q9NP94 309 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ZMYM6O95789 1325 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 CFLARO15519 480 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ASMTLO95671 621 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 HSPA4LO95757 839 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 HOXB7P09629 217 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 IMPDH2P12268 514 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 GCFC2P16383 781 aaKnown RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 FAM26FQ5R3K3 315 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 TEDDM1Q5T9Z0 273 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 EEPD1Q7L9B9 569 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 FAM160B2Q86V87 743 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 ZNF804BA4D1E1 1349 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 KBTBD13C9JR72 458 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 PSMA2P25787 234 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 PHKA2P46019 1235 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 AP1B1Q10567 949 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 MORF4L2Q15014 288 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 IRAK1BP1Q5VVH5 260 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 CCDC197Q8NCU1 140 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 PYROXD1Q8WU10 500 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 FAM49AQ9H0Q0 323 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 DHX36Q9H2U1 1008 aaKnown RBP5.95□□□□□ -1.46
SCN1A-209ENST00000635750 TRAF3IP3Q9Y228 551 aa5.95□□□□□ -1.46
SCN1A-209ENST00000635750 TEX28O15482 410 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 HDAC4P56524 1084 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 GNGT1P63211 74 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 CDO1Q16878 200 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ANO4Q32M45 955 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 BTBD8Q5XKL5 378 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 CENPUQ71F23 418 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 DDX42Q86XP3 938 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 STAMQ92783 540 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 FAM167AQ96KS9 214 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PPP1R16BQ96T49 567 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 KPNA7A9QM74 516 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 A1BGP04217 495 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 BMP3P12645 472 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PLS3P13797 630 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 NR2F2P24468 414 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 SYTL3Q4VX76 610 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 KLHDC4Q8TBB5 520 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 MAML1Q92585 1016 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 FAF2Q96CS3 445 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 MSTO1Q9BUK6 570 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 KANSL2Q9H9L4 492 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 AFF4Q9UHB7 1163 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ZC3H4Q9UPT8 1303 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 E7EWF7 191 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 GTPBP6O43824 516 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 SERPIND1P05546 499 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 CENPAP49450 140 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 NCALDP61601 193 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 SYDE2Q5VT97 1194 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 LRRC8BQ6P9F7 803 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TOGARAM2Q6ZUX3 1019 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 KCTD1Q719H9 257 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 ERICH1Q86X53 443 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 NOSTRINQ8IVI9 506 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 DBNDD2Q9BQY9 259 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PARVGQ9HBI0 331 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 EML4Q9HC35 981 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TJP2Q9UDY2 1190 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 USP17L3A6NCW0 530 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 USP17L4A6NCW7 530 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 C5orf58C9J3I9 102 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PRR23D1E9PI22 279 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 IGHDP01880 384 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PRR23D2P0DMB1 279 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 U2AF2P26368 475 aaKnown RBP eCLIP5.94□□□□□ -1.461e-6■■■□□ 14.9
SCN1A-209ENST00000635750 OAS2P29728 719 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 TRAPPC10P48553 1259 aa5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PSMC1P62191 440 aaKnown RBP5.94□□□□□ -1.46
SCN1A-209ENST00000635750 PTPROQ16827 1216 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms