RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 HDAC4P56524 1084 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 FKBP3Q00688 224 aaKnown RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 TAF12Q16514 161 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PROSER3Q2NL68 480 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 RABL6Q3YEC7 729 aaPredicted RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 SRRM1Q8IYB3 904 aaKnown RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 CYTH2Q99418 400 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 KRT82Q9NSB4 513 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 IPO11Q9UI26 975 aaKnown RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 MFAP3LO75121 409 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 SERPING1P05155 500 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ATICP31939 592 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 CYP2J2P51589 502 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 GABPAQ06546 454 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 NEK8Q86SG6 692 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 ZNF512BQ96KM6 892 aaPredicted RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 FAM167BQ9BTA0 163 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 VIPAS39Q9H9C1 493 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PSD3Q9NYI0 1048 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PCDHA13Q9Y5I0 950 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 NHSQ6T4R5 1651 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ESYT2A0FGR8 921 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 E9PMD0 336 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 MCF2LO15068 1137 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ECE1P42892 770 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PTK2Q05397 1052 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PTPROQ16827 1216 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 CRLF3Q8IUI8 442 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 SLFN12Q8IYM2 578 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 NDE1Q9NXR1 346 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ZNF711Q9Y462 761 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ANGPTL3Q9Y5C1 460 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 UTYO14607 1347 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 LRRC37A3O60309 1634 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 H7C0C1 242 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 MOCS3O95396 460 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ATP5OP48047 213 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 MFAP3P55082 362 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 PTGDRQ13258 359 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 FSCBQ5H9T9 825 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ENAHQ8N8S7 591 aaPredicted RBP9.43□□□□□ -0.9
PATJ-216ENST00000635214 GDAP1Q8TB36 358 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 CHMP6Q96FZ7 201 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 LRRC37BQ96QE4 947 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ISCA1Q9BUE6 129 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
PATJ-216ENST00000635214 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 PRDM1O75626 825 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 HAUS5O94927 633 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 RAD23BP54727 409 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 GIPC2Q8TF65 315 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 ZFP69BQ9UJL9 534 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 MAN1B1Q9UKM7 699 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 INTUQ9ULD6 942 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 PCDHA12Q9UN75 941 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 TARSL2A2RTX5 802 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 SGK1O00141 431 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 SCG2P13521 617 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 IL1RL1Q01638 556 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 GOLGA8FQ08AF8 430 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 GOLGA8DPQ0D2H9 430 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 SCRN1Q12765 414 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 LRRC24Q50LG9 513 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 COL23A1Q86Y22 540 aaPredicted RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 RDH13Q8NBN7 331 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 RIOK1Q9BRS2 568 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 SH3GLB2Q9NR46 395 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 SNX5Q9Y5X3 404 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 F8W031 263 aaPredicted RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 SASH1O94885 1247 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 FTCDO95954 541 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 CPP00450 1065 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 CDR2Q01850 454 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 CAV1Q03135 178 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 ASPRV1Q53RT3 343 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 PPM1KQ8N3J5 372 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 SLC17A8Q8NDX2 589 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 CATSPER1Q8NEC5 780 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 COG1Q8WTW3 980 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.42□□□□□ -0.99e-10■■■■■ 79.8
PATJ-216ENST00000635214 ATP6V1G3Q96LB4 118 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 ETNK1Q9HBU6 452 aa9.42□□□□□ -0.9
PATJ-216ENST00000635214 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 WARS2Q9UGM6 360 aaKnown RBP9.42□□□□□ -0.9
PATJ-216ENST00000635214 APOA1P02647 267 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms