RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 NAP1L1P55209 391 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 HNRNPH2P55795 449 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 RASSF7Q02833 373 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 PDE4CQ08493 712 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 RAPGEF1Q13905 1077 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 GIT2Q14161 759 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 NAB2Q15742 525 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 SLC18A3Q16572 532 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 KNOP1Q1ED39 458 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 GLE1Q53GS7 698 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 C10orf76Q5T2E6 689 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 NFRKBQ6P4R8 1299 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 LEKR1Q6ZMV7 388 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 EPM2AIP1Q7L775 607 aaPredicted RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 SH3BP5LQ7L8J4 393 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 CATSPER3Q86XQ3 398 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 COL23A1Q86Y22 540 aaPredicted RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 SIAH1Q8IUQ4 282 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 SPATA4Q8NEY3 305 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 GOLGA5Q8TBA6 731 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 AENQ8WTP8 325 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 LENG9Q96B70 501 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 CAMKK2Q96RR4 588 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 POLR3CQ9BUI4 534 aaPredicted RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 SELENOOQ9BVL4 669 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 GANQ9H2C0 597 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 PLCB1Q9NQ66 1216 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 ARMCX3Q9UH62 379 aaPredicted RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 BZW2Q9Y6E2 419 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 ATP8B3O60423 1300 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 BTNL10A8MVZ5 291 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 PIK3CDO00329 1044 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 SLC16A3O15427 465 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 GDF11O95390 407 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 EYA4O95677 639 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 AFPP02771 609 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 CYP3A4P08684 503 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 MMP10P09238 476 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 SPATA31C1P0DKV0 1188 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 EPB41P11171 864 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 RPL13P26373 211 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 TNFRSF8P28908 595 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 ACTN2P35609 894 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 ZNF76P36508 570 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 RAD51AP2Q09MP3 1159 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 KLHL30Q0D2K2 578 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 KCNH2Q12809 1159 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 PABPC4Q13310 644 aaKnown RBP eCLIP8.86□□□□□ -0.99
GPC3-204ENST00000631057 ZSCAN26Q16670 478 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 BMT2Q1RMZ1 405 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 USH1GQ495M9 461 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 CFAP221Q4G0U5 840 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 KLHDC7AQ5VTJ3 777 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 STYK1Q6J9G0 422 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 SFR1Q86XK3 245 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 TBC1D5Q92609 795 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 ZNF622Q969S3 477 aaKnown RBP eCLIP8.86□□□□□ -0.99
GPC3-204ENST00000631057 UIMC1Q96RL1 719 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 REEP2Q9BRK0 252 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 TLR10Q9BXR5 811 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 METTL14Q9HCE5 456 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 TYW1Q9NV66 732 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 SALL4Q9UJQ4 1053 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 VAV3Q9UKW4 847 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 TNS1Q9HBL0 1735 aaKnown RBP8.85□□□□□ -0.99
GPC3-204ENST00000631057 ZC3H4Q9UPT8 1303 aaKnown RBP8.85□□□□□ -0.99
GPC3-204ENST00000631057 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 MSH4O15457 936 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 BUB1O43683 1085 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 RNF40O75150 1001 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 RPS6KA5O75582 802 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 IVLP07476 585 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 SLURP2P0DP57 97 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 XRCC5P13010 732 aaKnown RBP8.85□□□□□ -0.99
GPC3-204ENST00000631057 CAPN2P17655 700 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 EPHB4P54760 987 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 IFI16Q16666 785 aaKnown RBP8.85□□□□□ -0.99
GPC3-204ENST00000631057 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
GPC3-204ENST00000631057 C8orf74Q6P047 294 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 EMBQ6PCB8 327 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 ANKRD13CQ8N6S4 541 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 AFAP1L1Q8TED9 768 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 P2RX7Q99572 595 aaKnown RBP8.85□□□□□ -0.99
GPC3-204ENST00000631057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.85□□□□□ -0.991e-12■■□□□ 13.7
GPC3-204ENST00000631057 FAM204AQ9H8W3 233 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 EHMT1Q9H9B1 1298 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 KCNQ5Q9NR82 932 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 STIM2Q9P246 746 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 RABGAP1Q9Y3P9 1069 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 PCDHGC5Q9Y5F6 944 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 PCDHAC2Q9Y5I4 1007 aa8.85□□□□□ -0.99
GPC3-204ENST00000631057 UBE4BO95155 1302 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 GOLGA6BA6NDN3 693 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 FAM86B1E9PN63 330 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 H0YIN7 160 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 MEIS1O00470 390 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 CES2O00748 559 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 EIF3DO15371 548 aaKnown RBP eCLIP8.84□□□□□ -0.992e-9■□□□□ 9.2
GPC3-204ENST00000631057 NCK2O43639 380 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms