RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 CDX2Q99626 313 aaPredicted RBP20.99■□□□□ 0.95
PNKP-224ENST00000631020 TEKT3Q9BXF9 490 aa20.99■□□□□ 0.95
PNKP-224ENST00000631020 UNC45AQ9H3U1 944 aa20.99■□□□□ 0.95
PNKP-224ENST00000631020 TTC12Q9H892 705 aaPredicted RBP20.99■□□□□ 0.95
PNKP-224ENST00000631020 CXXC1Q9P0U4 656 aaPredicted RBP20.99■□□□□ 0.95
PNKP-224ENST00000631020 PCDHA12Q9UN75 941 aa20.99■□□□□ 0.95
PNKP-224ENST00000631020 LAD1O00515 517 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 ZNF286BP0CG31 522 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 CHMP4BP1P59074 171 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 ACTR2P61160 394 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 RAB30Q15771 203 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 OTOP2Q7RTS6 562 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 TIFAQ96CG3 184 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 C16orf70Q9BSU1 422 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 PBX4Q9BYU1 374 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 HDAC6Q9UBN7 1215 aa20.98■□□□□ 0.95
PNKP-224ENST00000631020 EML1O00423 815 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 ATG7O95352 703 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 PRPHP41219 470 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 PPP2R5CQ13362 524 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 SLC39A14Q15043 492 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 ATL3Q6DD88 541 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 ZNF746Q6NUN9 644 aaPredicted RBP20.97■□□□□ 0.95
PNKP-224ENST00000631020 LINC00301Q8NCQ3 95 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 PPP1R13LQ8WUF5 828 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 CEP131Q9UPN4 1083 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 ATP6V1DQ9Y5K8 247 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 GBF1Q92538 1859 aa20.97■□□□□ 0.95
PNKP-224ENST00000631020 NOP56O00567 594 aaKnown RBP20.96■□□□□ 0.95
PNKP-224ENST00000631020 BMP15O95972 392 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 ACTN1P12814 892 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 TECP42680 631 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 KRT76Q01546 638 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 PTK7Q13308 1070 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 ABHD15Q6UXT9 468 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 SEPT1Q8WYJ6 367 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 ZNF576Q9H609 170 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 SLC4A7Q9Y6M7 1214 aa20.96■□□□□ 0.95
PNKP-224ENST00000631020 CHMP2AO43633 222 aa20.95■□□□□ 0.94
PNKP-224ENST00000631020 SELPP16109 830 aa20.95■□□□□ 0.94
PNKP-224ENST00000631020 MARCKSP29966 332 aaPredicted RBP20.95■□□□□ 0.94
PNKP-224ENST00000631020 ARL6IP4Q66PJ3 421 aaKnown RBP20.95■□□□□ 0.94
PNKP-224ENST00000631020 PCYT2Q99447 389 aa20.95■□□□□ 0.94
PNKP-224ENST00000631020 MSRAQ9UJ68 235 aa20.95■□□□□ 0.94
PNKP-224ENST00000631020 H3BRB1 525 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 LGALS2P05162 132 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 HOXC8P31273 242 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 TCF7P36402 384 aaPredicted RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 FXR2P51116 673 aaKnown RBP eCLIP20.94■□□□□ 0.94
PNKP-224ENST00000631020 GRIN1Q05586 938 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 DTHD1Q6ZMT9 781 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 DEFB128Q7Z7B8 93 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 SLC17A8Q8NDX2 589 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 TET1Q8NFU7 2136 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 TUT1Q9H6E5 874 aaKnown RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 DISC1Q9NRI5 854 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 CFAP45Q9UL16 551 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 POTEMA6NI47 508 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 GRXCR1A8MXD5 290 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 BAIAP3O94812 1187 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 YEATS4O95619 227 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 SMAP1Q8IYB5 467 aaPredicted RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 DHX38Q92620 1227 aaKnown RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 TNPO1Q92973 898 aaKnown RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 FBXO2Q9UK22 296 aaPredicted RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 RCOR1Q9UKL0 485 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 PCDHA10Q9Y5I2 948 aa20.94■□□□□ 0.94
PNKP-224ENST00000631020 MORC2Q9Y6X9 1032 aaPredicted RBP20.94■□□□□ 0.94
PNKP-224ENST00000631020 CHD9Q3L8U1 2897 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 IGKV6D-21A0A0A0MT36 114 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 VWA3AA6NCI4 1184 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 SPTLC2O15270 562 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 CKBP12277 381 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 NCLP19338 710 aaKnown RBP20.93■□□□□ 0.94
PNKP-224ENST00000631020 PBX2P40425 430 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 STK38Q15208 465 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 UTP14CQ5TAP6 766 aaKnown RBP20.93■□□□□ 0.94
PNKP-224ENST00000631020 NCAPH2Q6IBW4 605 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 LRRC8DQ7L1W4 858 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 MIER3Q7Z3K6 550 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 IGSF22Q8N9C0 903 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 PHOSPHO2Q8TCD6 241 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 SAMM50Q9Y512 469 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 TCHHQ07283 1943 aa20.93■□□□□ 0.94
PNKP-224ENST00000631020 WDR64B1ANS9 1081 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 LGR5O75473 907 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 SFNP31947 248 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 JAK3P52333 1124 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 KRT85P78386 507 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 PDIA5Q14554 519 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 SWSAP1Q6NVH7 229 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 MIS18BP1Q6P0N0 1132 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 TRIM50Q86XT4 487 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 CCDC60Q8IWA6 550 aaPredicted RBP20.92■□□□□ 0.94
PNKP-224ENST00000631020 MYLIPQ8WY64 445 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 SLC9A7Q96T83 725 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 TCEAL9Q9UHQ7 104 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 ZNF215Q9UL58 517 aaPredicted RBP20.92■□□□□ 0.94
PNKP-224ENST00000631020 PCDHA11Q9Y5I1 949 aa20.92■□□□□ 0.94
PNKP-224ENST00000631020 SRPRBQ9Y5M8 271 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms