RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 LAMC2Q13753 1193 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 POSTNQ15063 836 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 RNF180Q86T96 592 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 LXNQ9BS40 222 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 VTA1Q9NP79 307 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 COL20A1Q9P218 1284 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 POTEFA5A3E0 1075 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 PIK3CDO00329 1044 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 AKR1A1P14550 325 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 PLCG1P19174 1290 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 UBASH3AP57075 661 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 NAA30Q147X3 362 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 SYCP1Q15431 976 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 IL17AQ16552 155 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 POTEEQ6S8J3 1075 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 TSG101Q99816 390 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 MORF4L1Q9UBU8 362 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 LBX1P52954 281 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 SPAG1Q07617 926 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 LARP4BQ92615 738 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 ATP2A1O14983 1001 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 COPS5Q92905 334 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 MAPK8IP1Q9UQF2 711 aa13.78□□□□□ -0.2
SYNGAP1-207ENST00000628646 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 M0R2N6 131 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 HSD17B4P51659 736 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 CCL14Q16627 93 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 TRIML1Q8N9V2 468 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 RIT2Q99578 217 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 PAXBP1Q9Y5B6 917 aa13.77□□□□□ -0.2
SYNGAP1-207ENST00000628646 MCM6Q14566 821 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 RETREG2Q8NC44 543 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 MAML3Q96JK9 1138 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 PPP1R13BQ96KQ4 1090 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 CTAGE1Q96RT6 745 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 PDGFCQ9NRA1 345 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 SRRDQ9UH36 339 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 TBX3O15119 743 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 COBLO75128 1261 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 ACTR2P61160 394 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 PSMC5P62195 406 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 EPHA7Q15375 998 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 DGKDQ16760 1214 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 PTPN21Q16825 1174 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 GLT1D1Q96MS3 346 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 XPNPEP3Q9NQH7 507 aa13.77□□□□□ -0.21
SYNGAP1-207ENST00000628646 SOWAHBA6NEL2 793 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 CPT1AP50416 773 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 E2F4Q16254 413 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 C17orf99Q6UX52 265 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 PRKAG2Q9UGJ0 569 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 E9PMD0 336 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 TUBB4AP04350 444 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 TLK2Q86UE8 772 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 MTRQ99707 1265 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 DICER1Q9UPY3 1922 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 PGK1P00558 417 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 MRPL44Q9H9J2 332 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZSCAN12O43309 604 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 HMGCRP04035 888 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 PLA2G4BP0C869 781 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 TGFB3P10600 412 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 RSPH3Q86UC2 560 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 ABRAQ8N0Z2 381 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 ZNF668Q96K58 619 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 SMARCAD1Q9H4L7 1026 aa13.76□□□□□ -0.21
SYNGAP1-207ENST00000628646 BEX3Q00994 111 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 CUL4BQ13620 913 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 HS2ST1Q7LGA3 356 aa13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 ENOX1Q8TC92 643 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 JPH2Q9BR39 696 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 AGO4Q9HCK5 861 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 TRMT1Q9NXH9 659 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-207ENST00000628646 LARSQ9P2J5 1176 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms