RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-209ENST00000627620 CFAP36Q96G28 342 aa13.8□□□□□ -0.2
SCN8A-209ENST00000627620 TTC1Q99614 292 aa13.8□□□□□ -0.2
SCN8A-209ENST00000627620 PCGF5Q86SE9 256 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 MINPP1Q9UNW1 487 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 MTMR1Q13613 665 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 BBS9Q3SYG4 887 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 EFCAB13Q8IY85 973 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 SPDL1Q96EA4 605 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 POTEMA6NI47 508 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 OR6B3Q8NGW1 331 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 TCP11Q8WWU5 503 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 FIS1Q9Y3D6 152 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 EXOC1LA0A1B0GW35 172 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 KPNA2P52292 529 aaKnown RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 CDO1Q16878 200 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 NEK9Q8TD19 979 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PARD6BQ9BYG5 372 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 ZWILCHQ9H900 591 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PPME1Q9Y570 386 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 MFAP3LO75121 409 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 ZBED1O96006 694 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 KRT10P13645 584 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 RWDD2BP57060 319 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 SLC12A1Q13621 1099 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PDE1CQ14123 709 aaPredicted RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 SNCBQ16143 134 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 NOP9Q86U38 636 aaKnown RBP13.79□□□□□ -0.2
SCN8A-209ENST00000627620 NUDCD1Q96RS6 583 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PRKAG2Q9UGJ0 569 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
SCN8A-209ENST00000627620 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 TOM1L1O75674 476 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 MAP2K2P36507 400 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 SLC7A5Q01650 507 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 NNTQ13423 1086 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 SCINQ9Y6U3 715 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 SAMD9LQ8IVG5 1584 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 CPSF1Q10570 1443 aaKnown RBP13.78□□□□□ -0.2
SCN8A-209ENST00000627620 SNAP23O00161 211 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 ZNF449Q6P9G9 518 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 CYB5R4Q7L1T6 521 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 HSPH1Q92598 858 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 ATP6V0A4Q9HBG4 840 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 PSMA2P25787 234 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 RHOT2Q8IXI1 618 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 MGEA5O60502 916 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 PRELPP51888 382 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 FMO2Q99518 471 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
SCN8A-209ENST00000627620 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 DNAJC12Q9UKB3 198 aa13.78□□□□□ -0.2
SCN8A-209ENST00000627620 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 CLGNO14967 610 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 SPDYE6P0CI01 402 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 EPHB1P54762 984 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 WHAMMQ8TF30 809 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L15C9J2P7 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L13C9JLJ4 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L11C9JVI0 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L18D6R9N7 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L22D6RA61 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L17D6RBQ6 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L19D6RCP7 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L20D6RJB6 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L24Q0WX57 530 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 STXBP2Q15833 593 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 USP17L6PQ6QN14 398 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 DEPDC1BQ8WUY9 529 aa13.77□□□□□ -0.2
SCN8A-209ENST00000627620 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.2
SCN8A-209ENST00000627620 ABT1Q9ULW3 272 aaKnown RBP13.77□□□□□ -0.2
SCN8A-209ENST00000627620 NOVA2Q9UNW9 492 aaKnown RBP13.77□□□□□ -0.2
SCN8A-209ENST00000627620 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
SCN8A-209ENST00000627620 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
SCN8A-209ENST00000627620 SFR1Q86XK3 245 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 CNOT10Q9H9A5 744 aaKnown RBP13.77□□□□□ -0.21
SCN8A-209ENST00000627620 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 PIM2Q9P1W9 311 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 CCDC151A5D8V7 595 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 NMT2O60551 498 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 MYL3P08590 195 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 BRINP3Q76B58 766 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 STK36Q9NRP7 1315 aa13.77□□□□□ -0.21
SCN8A-209ENST00000627620 WDR64B1ANS9 1081 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms