RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 MYO9BQ13459 2157 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 FAM205CA6NFA0 338 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 SLC37A4O43826 429 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 CXCL10P02778 98 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 ATP4AP20648 1035 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 TRAF7Q6Q0C0 670 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 SLFN12Q8IYM2 578 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 PCDHA2Q9Y5H9 948 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 SLC4A7Q9Y6M7 1214 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 WDR81Q562E7 1941 aa18.88■□□□□ 0.61
UBE3D-208ENST00000626828 CHMP2AO43633 222 aa18.87■□□□□ 0.61
UBE3D-208ENST00000626828 NBNO60934 754 aa18.87■□□□□ 0.61
UBE3D-208ENST00000626828 KLRC1P26715 233 aa18.87■□□□□ 0.61
UBE3D-208ENST00000626828 GNL2Q13823 731 aaKnown RBP18.87■□□□□ 0.61
UBE3D-208ENST00000626828 FAM26DQ5JW98 314 aa18.87■□□□□ 0.61
UBE3D-208ENST00000626828 HAS1Q92839 578 aa18.87■□□□□ 0.61
UBE3D-208ENST00000626828 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
UBE3D-208ENST00000626828 CXXC1Q9P0U4 656 aaPredicted RBP18.87■□□□□ 0.61
UBE3D-208ENST00000626828 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.87■□□□□ 0.61
UBE3D-208ENST00000626828 EVPLQ92817 2033 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 COL1A2P08123 1366 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 ZBBXA8MT70 800 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 PPP2R5CQ13362 524 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 FAM109BQ6ICB4 259 aaPredicted RBP18.86■□□□□ 0.61
UBE3D-208ENST00000626828 CNKSR3Q6P9H4 555 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 MTHFD1LQ6UB35 978 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 RUFY4Q6ZNE9 571 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 NME8Q8N427 588 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 DNAJB3Q8WWF6 145 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 CEP131Q9UPN4 1083 aa18.86■□□□□ 0.61
UBE3D-208ENST00000626828 SMIM35A0A1B0GVV1 85 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 BAIAP3O94812 1187 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 IKBKEQ14164 716 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 MBTPS1Q14703 1052 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 IER5Q5VY09 327 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 TRAPPC12Q8WVT3 735 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 SMC3Q9UQE7 1217 aa18.85■□□□□ 0.61
UBE3D-208ENST00000626828 ABHD14A-ACY1A0A1B0GW23 586 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 MAGEB2O15479 319 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 EFCAB14O75071 495 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 ATP2B1P20020 1258 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 CALCRLQ16602 461 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 TRMT1LQ7Z2T5 733 aaKnown RBP18.84■□□□□ 0.61
UBE3D-208ENST00000626828 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 PHOSPHO2Q8TCD6 241 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 PCDHA12Q9UN75 941 aa18.84■□□□□ 0.61
UBE3D-208ENST00000626828 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
UBE3D-208ENST00000626828 ZNF862O60290 1169 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.6
UBE3D-208ENST00000626828 CHRNA1P02708 482 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 CTSHP09668 335 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 U2AF2P26368 475 aaKnown RBP eCLIP18.83■□□□□ 0.6
UBE3D-208ENST00000626828 GJB2P29033 226 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 PSMC5P62195 406 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 EPHA7Q15375 998 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 XKR3Q5GH77 459 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 DBF4BQ8NFT6 615 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 SEPT8Q92599 483 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 FAM49AQ9H0Q0 323 aaPredicted RBP18.83■□□□□ 0.6
UBE3D-208ENST00000626828 MSRAQ9UJ68 235 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 VAV3Q9UKW4 847 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 TANC1Q9C0D5 1861 aa18.83■□□□□ 0.6
UBE3D-208ENST00000626828 LAMA3Q16787 3333 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 GRXCR1A8MXD5 290 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 ZBTB42B2RXF5 422 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 M0QZ92 97 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 EML1O00423 815 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 NEMFO60524 1076 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 OATP04181 439 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 P4HBP07237 508 aaKnown RBP18.82■□□□□ 0.6
UBE3D-208ENST00000626828 ATP2A2P16615 1042 aaKnown RBP18.82■□□□□ 0.6
UBE3D-208ENST00000626828 KCNJ6P48051 423 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 TRAPPC10P48553 1259 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 MRPS6P82932 125 aaKnown RBP18.82■□□□□ 0.6
UBE3D-208ENST00000626828 ORC2Q13416 577 aaPredicted RBP18.82■□□□□ 0.6
UBE3D-208ENST00000626828 PLEKHG4Q58EX7 1191 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 DEFB123Q8N688 67 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 ZBTB10Q96DT7 871 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
UBE3D-208ENST00000626828 NIFKQ9BYG3 293 aaKnown RBP18.82■□□□□ 0.6
UBE3D-208ENST00000626828 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
UBE3D-208ENST00000626828 H3BQV1 296 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 SLC34A2O95436 690 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 MCM7P33993 719 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 TXKP42681 527 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 QARSP47897 775 aaKnown RBP18.81■□□□□ 0.6
UBE3D-208ENST00000626828 PRKCEQ02156 737 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 MGAT3Q09327 533 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 CUL4AQ13619 759 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 RAB30Q15771 203 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 UGCGQ16739 394 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 SLC9A7Q96T83 725 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 TTC12Q9H892 705 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-208ENST00000626828 CDY2AQ9Y6F7 541 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 SQORQ9Y6N5 450 aa18.81■□□□□ 0.6
UBE3D-208ENST00000626828 TMEM265A0A087WTH1 108 aa18.8■□□□□ 0.6
UBE3D-208ENST00000626828 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms