RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 KLHL33A6NCF5 533 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 LRRC53A6NM62 1247 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PRDM1O75626 825 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 NEBLO76041 1014 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PLEKHA8P1O95397 391 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CXCR5P32302 372 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 GBP2P32456 591 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 MCM7P33993 719 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CCNG1P51959 295 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 RASSF7Q02833 373 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 EN1Q05925 392 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 LRRC63Q05C16 580 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ZNF844Q08AG5 666 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 UBE4AQ14139 1066 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PPP2R5AQ15172 486 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PPP2R5EQ16537 467 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 MSL1Q68DK7 614 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 EP400NLQ6ZTU2 488 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CPLX4Q7Z7G2 160 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CEP57Q86XR8 500 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 EGFL6Q8IUX8 553 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 STAG2Q8N3U4 1231 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 LCORLQ8N3X6 602 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 RASGEF1CQ8N431 466 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 GUF1Q8N442 669 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SRBD1Q8N5C6 995 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ANKS4BQ8N8V4 417 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CCDC63Q8NA47 563 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CCDC26Q8TAB7 109 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CNKSR1Q969H4 720 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CHMP6Q96FZ7 201 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 MS4A14Q96JA4 679 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 GJD4Q96KN9 370 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 XPO6Q96QU8 1125 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 BRIP1Q9BX63 1249 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM129AQ9BZQ8 928 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 TRIM9Q9C026 710 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SLITRK6Q9H5Y7 841 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 RIC8AQ9NPQ8 531 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.56□□□□□ -1.686e-15■■□□□ 11.6
PTP4A1-205ENST00000626021 EHD2Q9NZN4 543 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CNOT8Q9UFF9 292 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SLC12A4Q9UP95 1085 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 C15orf41Q9Y2V0 281 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SCN9AQ15858 1988 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 AFF2P51816 1311 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SLX4Q8IY92 1834 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 GOLGA6L10A0A0M3HER8 536 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 F8W031 263 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 NCK2O43639 380 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PRKAB2O43741 272 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PALMO75781 387 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ZBTB48P10074 688 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PAX7P23759 505 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CCND1P24385 295 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ANXA13P27216 316 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CTNNA1P35221 906 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 USP11P51784 963 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 GUCY2FP51841 1108 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 NPEPPSP55786 919 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 MARSP56192 900 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ERVK-9P63128 1117 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CHRNDQ07001 517 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 KCNMA1Q12791 1236 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 STK4Q13043 487 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SLC18A3Q16572 532 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SPRED3Q2MJR0 410 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ERFEQ4G0M1 354 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CMPK2Q5EBM0 449 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 HIBCHQ6NVY1 386 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 UNC13DQ70J99 1090 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 RRAGAQ7L523 313 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 CABP7Q86V35 215 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 TAF4BQ92750 862 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 ZNF317Q96PQ6 595 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SPAG5Q96R06 1193 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 PSMD1Q99460 953 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SH3GL3Q99963 347 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 HINFPQ9BQA5 517 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 TMEM109Q9BVC6 243 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 TXLNGYQ9BZA5 131 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SEMA6BQ9H3T3 888 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 BSDC1Q9NW68 430 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 SMARCAL1Q9NZC9 954 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 NOP53Q9NZM5 478 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 AIPL1Q9NZN9 384 aa4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 TTC7AQ9ULT0 858 aaPredicted RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 NOVA2Q9UNW9 492 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 DIS3Q9Y2L1 958 aaKnown RBP4.56□□□□□ -1.68
PTP4A1-205ENST00000626021 FLT1P17948 1338 aa4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 A0A0A6YYK5 440 aaPredicted RBP4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 ZSCAN5CA6NGD5 496 aaPredicted RBP4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 SART1O43290 800 aaKnown RBP4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 BUB1O43683 1085 aa4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 PPFIA2O75334 1257 aa4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 KIF4AO95239 1232 aa4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 ANP32DO95626 131 aa4.55□□□□□ -1.68
PTP4A1-205ENST00000626021 NUDT17P0C025 328 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms