RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 EPHB4P54760 987 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 PPP2CBP62714 309 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 PPP2CAP67775 309 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 ZNF460Q14592 562 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 SURF1Q15526 300 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 FNDC3BQ53EP0 1204 aaKnown RBP6.63□□□□□ -1.35
BRCA1-229ENST00000621897 RALYLQ86SE5 291 aaKnown RBP6.63□□□□□ -1.35
BRCA1-229ENST00000621897 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 KCNH7Q9NS40 1196 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 UCKL1Q9NWZ5 548 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 TMEM260Q9NX78 707 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 GALNT8Q9NY28 637 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
BRCA1-229ENST00000621897 SLC12A8A0AV02 714 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 GPR42O15529 346 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 GLRX3O76003 335 aaKnown RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 CNOT4O95628 575 aaKnown RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 APPP05067 770 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 ADRB1P08588 477 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 ZBTB48P10074 688 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 SDSP20132 328 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 TOP3AQ13472 1001 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 ZNF827Q17R98 1081 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 ZCCHC8Q6NZY4 707 aaKnown RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 ARHGEF18Q6ZSZ5 1173 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 C2orf69Q8N8R5 385 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 ASB15Q8WXK1 588 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 LOXL4Q96JB6 756 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 MEGF9Q9H1U4 602 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
BRCA1-229ENST00000621897 TNPO3Q9Y5L0 923 aaKnown RBP6.62□□□□□ -1.35
BRCA1-229ENST00000621897 M0R2C6 588 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 NPTXRO95502 500 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 ASMTLO95671 621 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 POLD1P28340 1107 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 IGFALSP35858 605 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 ADCY8P40145 1251 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 ADAM17P78536 824 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 IRF9Q00978 393 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 TMEM132BQ14DG7 1078 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 STILQ15468 1287 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 WDR72Q3MJ13 1102 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 OTOP1Q7RTM1 612 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 REXO1L1PQ8IX06 675 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 RNPC3Q96LT9 517 aaKnown RBP6.61□□□□□ -1.35
BRCA1-229ENST00000621897 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 SAMD11Q96NU1 681 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 GBP4Q96PP9 640 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 SAMD15Q9P1V8 674 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 ST6GALNAC2Q9UJ37 374 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 SLC4A7Q9Y6M7 1214 aa6.61□□□□□ -1.35
BRCA1-229ENST00000621897 PRAMEF22A3QJZ6 481 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 NPEPPSL1A6NEC2 478 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 FOXP2O15409 715 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 OPA1O60313 960 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 KRT37O76014 449 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 SDHAP31040 664 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 USP10Q14694 798 aaKnown RBP6.6□□□□□ -1.35
BRCA1-229ENST00000621897 ICAM4Q14773 271 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 DPP8Q6V1X1 898 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-229ENST00000621897 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 KRTAP4-2Q9BYR5 136 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 JADE2Q9NQC1 790 aa6.6□□□□□ -1.35
BRCA1-229ENST00000621897 TRAF5O00463 557 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 DVL2O14641 736 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 ASLP04424 464 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 ECE1P42892 770 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 RRADP55042 308 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 PABPC4Q13310 644 aaKnown RBP eCLIP6.59□□□□□ -1.35
BRCA1-229ENST00000621897 KANK2Q63ZY3 851 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 DDX53Q86TM3 631 aaKnown RBP6.59□□□□□ -1.35
BRCA1-229ENST00000621897 GGNQ86UU5 652 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 BOCQ9BWV1 1114 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 BTBD2Q9BX70 525 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 ZDHHC5Q9C0B5 715 aa6.59□□□□□ -1.35
BRCA1-229ENST00000621897 HIP1RO75146 1068 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 ETV4P43268 484 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 CD83Q01151 205 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 C21orf62-AS1Q17RA5 79 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 SLFN13Q68D06 897 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 LARP4Q71RC2 724 aaKnown RBP eCLIP6.58□□□□□ -1.36
BRCA1-229ENST00000621897 TTC9BQ8N6N2 239 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 CHST14Q8NCH0 376 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 HIPK4Q8NE63 616 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 DNERQ8NFT8 737 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 ERCC4Q92889 916 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-229ENST00000621897 CARD11Q9BXL7 1154 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 OR10A5Q9H207 317 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 CDC42EP3Q9UKI2 254 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 ASB1Q9Y576 335 aa6.58□□□□□ -1.36
BRCA1-229ENST00000621897 B4E1Z4 1266 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 GOLGA6L22H0YM25 854 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 CUTAO60888 179 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 KCNQ1P51787 676 aa6.57□□□□□ -1.36
BRCA1-229ENST00000621897 NOLC1Q14978 699 aaKnown RBP eCLIP6.57□□□□□ -1.36
BRCA1-229ENST00000621897 TKFCQ3LXA3 575 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms