RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZNF185O15231 689 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 CAP2P40123 477 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 AMPD2Q01433 879 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 APBA1Q02410 837 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 GUCA2AQ02747 115 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 INF2Q27J81 1249 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 ARL6IP4Q66PJ3 421 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 DCAF4Q8WV16 495 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 MKL1Q969V6 931 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 SHISA4Q96DD7 197 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 DHTKD1Q96HY7 919 aaPredicted RBP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 SH2D4AQ9H788 454 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 GPRC5DQ9NZD1 345 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 KIAA1551Q9HCM1 1747 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 PNMA6FA0A0J9YX94 578 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 A0A1W2PRG0 241 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 MYL1P05976 194 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 SLC7A5Q01650 507 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 LETM2Q2VYF4 491 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 USH1GQ495M9 461 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 DCAF15Q66K64 600 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 KCTD16Q68DU8 428 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 CNNM4Q6P4Q7 775 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC121Q6ZUS5 278 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 NCAPGQ9BPX3 1015 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 RIOX1Q9H6W3 641 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 DISC1Q9NRI5 854 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 STIM2Q9P246 746 aa7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 BCCIPQ9P287 314 aaKnown RBP eCLIP7.67□□□□□ -1.18
SRGAP3-213ENST00000618999 LRRC10BA6NIK2 292 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 EIF3HO15372 352 aaKnown RBP eCLIP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 PRMT3O60678 531 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 SYF2O95926 243 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 SMARCA1P28370 1054 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 NOVP48745 357 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ADCY7P51828 1080 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ENOX2Q16206 610 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 GALNT17Q6IS24 598 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 SIAH1Q8IUQ4 282 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 REXO1Q8N1G1 1221 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ZBED3Q96IU2 234 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 DNAJC7Q99615 494 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 TFR2Q9UP52 801 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 PCDHA1Q9Y5I3 950 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ADAMTSL1Q8N6G6 1762 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ZBTB5O15062 677 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 SNHG28P0DPA3 235 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CXCR5P32302 372 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 MRPL12P52815 198 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 TNNC1P63316 161 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 PDCLQ13371 301 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC40Q4G0X9 1142 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 FAM83BQ5T0W9 1011 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 RRAGAQ7L523 313 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 APTXQ7Z2E3 356 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 APOBEC3FQ8IUX4 373 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ADSSL1Q8N142 457 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 RUBCNQ92622 972 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 P2RX5Q93086 422 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CABS1Q96KC9 395 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC43Q96MW1 224 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ZNF341Q9BYN7 854 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 SNX12Q9UMY4 172 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 FARP1Q9Y4F1 1045 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CTDP1Q9Y5B0 961 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 PIK3CDO00329 1044 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 MOCS3O95396 460 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 YBX3P16989 372 aaKnown RBP eCLIP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 IBSPP21815 317 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 HPDP32754 393 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 HERVK_113P62684 666 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 MRPS25P82663 173 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 NNTQ13423 1086 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 NONOQ15233 471 aaKnown RBP eCLIP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CDC37Q16543 378 aaPredicted RBP7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 SYDE2Q5VT97 1194 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 GLYCTKQ8IVS8 523 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC114Q96M63 670 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 FZD1Q9UP38 647 aa7.66□□□□□ -1.18
SRGAP3-213ENST00000618999 ADAMTS3O15072 1205 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 CCNE1P24864 410 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 NF2P35240 595 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 QRICH1Q2TAL8 776 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 KRT25Q7Z3Z0 450 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 CABP7Q86V35 215 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC155Q8N6L0 562 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 ANKRD13CQ8N6S4 541 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 SPATA4Q8NEY3 305 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 PRR7Q8TB68 274 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 HLA-CQ95604 372 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 DCPSQ96C86 337 aaKnown RBP7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 WRNIP1Q96S55 665 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 RAB34Q9BZG1 259 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 PSTPIP2Q9H939 334 aa7.65□□□□□ -1.18
SRGAP3-213ENST00000618999 BMP2KQ9NSY1 1161 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms