RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 AP3B2Q13367 1082 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 KARSQ15046 597 aaKnown RBP5.18□□□□□ -1.58
SYCP1-210ENST00000618516 ISM2Q6H9L7 571 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 PPP1R18Q6NYC8 613 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 DYMQ7RTS9 669 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 TRMT44Q8IYL2 757 aaKnown RBP5.18□□□□□ -1.58
SYCP1-210ENST00000618516 NLRP7Q8WX94 980 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 EPSTI1Q96J88 318 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 GBP3Q9H0R5 595 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 KIAA1024Q9UPX6 916 aa5.18□□□□□ -1.58
SYCP1-210ENST00000618516 IGLV3-22A0A075B6J6 115 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 NPHP3-ACAD11A0A0J9YXS1 232 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 E9PMD0 336 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ARVCFO00192 962 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ZNF862O60290 1169 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PPFIA4O75335 1185 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 KRT18P05783 430 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PBX3P40426 434 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 TOB1P50616 345 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 GJA9P57773 515 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 CCDC85BQ15834 202 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 GRIK4Q16099 956 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ZNF618Q5T7W0 954 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 FAM102BQ5T8I3 360 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ZNF365Q70YC5 407 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 CREBRFQ8IUR6 639 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 BHMT2Q9H2M3 363 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 LRWD1Q9UFC0 647 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PCDHA10Q9Y5I2 948 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 UBIAD1Q9Y5Z9 338 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 BDP1A6H8Y1 2624 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 GREB1LQ9C091 1923 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 A0A0U1RQG5 324 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 C17orf102A2RUQ5 167 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 LRRIQ4A6NIV6 560 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 WDR64B1ANS9 1081 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PIK3CDO00329 1044 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 OR52Z1P0C646 297 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 IGFBP4P22692 258 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 MCM2P49736 904 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 CLK2P49760 499 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 POLGP54098 1239 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 NLRP11P59045 1033 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 SHHQ15465 462 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 SKIV2LQ15477 1246 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 MIS18BP1Q6P0N0 1132 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 NFRKBQ6P4R8 1299 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 RETREG2Q8NC44 543 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PPTC7Q8NI37 304 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 HAS1Q92839 578 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 LENG9Q96B70 501 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 RNPC3Q96LT9 517 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 C16orf70Q9BSU1 422 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 CDHR5Q9HBB8 845 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PDLIM7Q9NR12 457 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 DDX19AQ9NUU7 478 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ERAP1Q9NZ08 941 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 INPP5FQ9Y2H2 1132 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 FRYLO94915 3013 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 MGAMO43451 1857 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 GOLGA6L4A6NEF3 574 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 A6NJR5 290 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 CCDC169A6NNP5 214 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 INO80B-WBP1J3KQ70 363 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 RFXAPO00287 272 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PBX2P40425 430 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 UBA7P41226 1012 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 MATR3P43243 847 aaKnown RBP eCLIP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 AFMP43652 599 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 SPOUT1Q5T280 376 aaKnown RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 EFCAB12Q6NXP0 572 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 DTHD1Q6ZMT9 781 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ZNF467Q7Z7K2 595 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 GRAMD1CQ8IYS0 662 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 DBF4BQ8NFT6 615 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 GPRASP2Q96D09 838 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 CDHR1Q96JP9 859 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PCYT2Q99447 389 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 INO80BQ9C086 356 aaPredicted RBP5.17□□□□□ -1.58
SYCP1-210ENST00000618516 PNMA2Q9UL42 364 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 MTMR6Q9Y217 621 aa5.17□□□□□ -1.58
SYCP1-210ENST00000618516 ZDBF2Q9HCK1 2354 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 SPTBN2O15020 2390 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 FAM170AA1A519 330 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 MED24O75448 989 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 PSAPP07602 524 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 SUPT20HL2P0C7V6 817 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 SMARCA1P28370 1054 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 CD52P31358 61 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 MAMSTRQ6ZN01 415 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 DHX58Q96C10 678 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 EIF2AK1Q9BQI3 630 aaKnown RBP5.16□□□□□ -1.58
SYCP1-210ENST00000618516 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.16□□□□□ -1.58
SYCP1-210ENST00000618516 CRISPLD2Q9H0B8 497 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 SMARCAD1Q9H4L7 1026 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.16□□□□□ -1.58
SYCP1-210ENST00000618516 POLR3EQ9NVU0 708 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 HCSTQ9UBK5 93 aa5.16□□□□□ -1.58
SYCP1-210ENST00000618516 HES2Q9Y543 173 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms