RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 KIF20AO95235 890 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 SLC9A1P19634 815 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 PTGER2P43116 358 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
CIITA-212ENST00000618207 KIF5AQ12840 1032 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 SRGAP1Q7Z6B7 1085 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 BAP1Q92560 729 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 ZBED3Q96IU2 234 aaPredicted RBP13.66□□□□□ -0.22
CIITA-212ENST00000618207 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 RPAP3Q9H6T3 665 aaPredicted RBP13.66□□□□□ -0.22
CIITA-212ENST00000618207 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 KCNH7Q9NS40 1196 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 MYO6Q9UM54 1294 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 FRMD3A2A2Y4 597 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 ZNF185O15231 689 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 ICAM1P05362 532 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 VCAM1P19320 739 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 TGFB2P61812 414 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 SP4Q02446 784 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 TRAF1Q13077 416 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 TNFAIP1Q13829 316 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 TMCO3Q6UWJ1 677 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 FAM133AQ8N9E0 248 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 POLR3CQ9BUI4 534 aaPredicted RBP13.66□□□□□ -0.22
CIITA-212ENST00000618207 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
CIITA-212ENST00000618207 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
CIITA-212ENST00000618207 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 BUB1O43683 1085 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 NOL4O94818 638 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 RPS6P62753 249 aaKnown RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 SLC5A5Q92911 643 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 A0A1W2PQJ5 194 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 TESPA1A2RU30 521 aaPredicted RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 MOCS3O95396 460 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 NR3C1P04150 777 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 PNMA6AP0CW24 399 aaPredicted RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 FIGNQ5HY92 759 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 ODR4Q5SWX8 454 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 ANGEL2Q5VTE6 544 aaKnown RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 MIER3Q7Z3K6 550 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
CIITA-212ENST00000618207 ATG4CQ96DT6 458 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 MXRA8Q9BRK3 442 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 PCDHA13Q9Y5I0 950 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
CIITA-212ENST00000618207 CXCR5P32302 372 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 CYP2J2P51589 502 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 CLEC4DQ8WXI8 215 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 SYNPO2Q9UMS6 1093 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 RIPK3Q9Y572 518 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 MYH11P35749 1972 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 ASTN1O14525 1302 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 ARHGEF35A5YM69 484 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 TLR2O60603 784 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 MAGEA1P43355 309 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 VAV2P52735 878 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 HMGCS2P54868 508 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 PPP2R5CQ13362 524 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 GJB7Q6PEY0 223 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 KCNG1Q9UIX4 513 aa13.64□□□□□ -0.23
CIITA-212ENST00000618207 CTAGE15A4D2H0 777 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 WDR46O15213 610 aaKnown RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 CTAGE8P0CG41 777 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 XRCC5P13010 732 aaKnown RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 MRPS9P82933 396 aaKnown RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 PTPROQ16827 1216 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 SFMBT2Q5VUG0 894 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 CTAGE6Q86UF2 777 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 CTAGE4Q8IX94 777 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 GPR161Q8N6U8 529 aaKnown RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 CEP112Q8N8E3 955 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.23
CIITA-212ENST00000618207 ZHX2Q9Y6X8 837 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 ATAD5Q96QE3 1844 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 TISP43B9A030 160 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 PEX10O60683 326 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 ITGB3BPQ13352 177 aaPredicted RBP13.63□□□□□ -0.23
CIITA-212ENST00000618207 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 ADAMTS1Q9UHI8 967 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 SALL4Q9UJQ4 1053 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 SAR1BQ9Y6B6 198 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 ZNF541Q9H0D2 1346 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 TGFB1I1O43294 461 aa13.63□□□□□ -0.23
CIITA-212ENST00000618207 USO1O60763 962 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms