RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 METTL7BQ6UX53 244 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 CYB5R4Q7L1T6 521 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 CENPQQ7L2Z9 268 aaPredicted RBP9.8□□□□□ -0.84
GPC6-202ENST00000617456 ADGRD2Q7Z7M1 963 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 RBM23Q86U06 439 aaKnown RBP9.8□□□□□ -0.84
GPC6-202ENST00000617456 PIBF1Q8WXW3 757 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 FAM86C1Q9NVL1 165 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 ZNF215Q9UL58 517 aaPredicted RBP9.8□□□□□ -0.84
GPC6-202ENST00000617456 PLAGL2Q9UPG8 496 aa9.8□□□□□ -0.84
GPC6-202ENST00000617456 LAMA4Q16363 1823 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 DDAH1O94760 285 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 LETM1O95202 739 aaPredicted RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 DNAJB1P25685 340 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 MARK3P27448 753 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 NRIP1P48552 1158 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 ADAM17P78536 824 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 MRPS9P82933 396 aaKnown RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 ZXDAP98168 799 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 CAMK1Q14012 370 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 PAN2Q504Q3 1202 aaKnown RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 RSPH3Q86UC2 560 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 EGFL6Q8IUX8 553 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 MB21D2Q8IYB1 491 aaPredicted RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 CLP1Q92989 425 aaKnown RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 PPP2R3CQ969Q6 453 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 PIGSQ96S52 555 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 SPZ1Q9BXG8 430 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 RC3H2Q9HBD1 1191 aaKnown RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 PCDHGC5Q9Y5F6 944 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 MRPL42Q9Y6G3 142 aaKnown RBP9.79□□□□□ -0.84
GPC6-202ENST00000617456 ATG2AQ2TAZ0 1938 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 COL4A6Q14031 1691 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
GPC6-202ENST00000617456 SPATA31C2B4DYI2 1134 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 PIK3CDO00329 1044 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 FIBPO43427 364 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 ST18O60284 1047 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 PPFIA3O75145 1194 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 ITGB1P05556 798 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 CD52P31358 61 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 MGAT3Q09327 533 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 TCF15Q12870 199 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 PPFIA1Q13136 1202 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 NECTIN1Q15223 517 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 SLC35G1Q2M3R5 365 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 TSGA10IPQ3SY00 556 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 BMP8AQ7Z5Y6 402 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 EFHBQ8N7U6 833 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 KLHL23Q8NBE8 558 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 CTCFLQ8NI51 663 aaPredicted RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 SPPL3Q8TCT6 385 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 DNAJB3Q8WWF6 145 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 ZNF689Q96CS4 500 aaPredicted RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 ZBTB10Q96DT7 871 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 MSLNLQ96KJ4 702 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 RPGRIP1Q96KN7 1286 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 INPP4AQ96PE3 977 aaPredicted RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 LSG1Q9H089 658 aaKnown RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 EHMT1Q9H9B1 1298 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 CLEC1BQ9P126 229 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 USP15Q9Y4E8 981 aaPredicted RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 RBM8AQ9Y5S9 174 aaKnown RBP9.78□□□□□ -0.84
GPC6-202ENST00000617456 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 NRCAMQ92823 1304 aa9.78□□□□□ -0.84
GPC6-202ENST00000617456 RIF1Q5UIP0 2472 aaKnown RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 LOC730098B7Z3J9 87 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 GFRA3O60609 400 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 DGKIO75912 1065 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 EYA4O95677 639 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 ICAM3P32942 547 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 TCF7P36402 384 aaPredicted RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 GATMP50440 423 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 RCAN1P53805 252 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 VCPP55072 806 aaKnown RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 IGBP1P78318 339 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 GRIK4Q16099 956 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 PKN1Q16512 942 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 FBXO47Q5MNV8 452 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 TAF2Q6P1X5 1199 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 CMTR2Q8IYT2 770 aaKnown RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 FBXL6Q8N531 539 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 SMRP1Q8NCR6 262 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 MICAL1Q8TDZ2 1067 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 POF1BQ8WVV4 589 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 LINC01599Q8WXQ3 324 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 ATOH1Q92858 354 aaPredicted RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 PRRX2Q99811 253 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 ESYT1Q9BSJ8 1104 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 FAM49AQ9H0Q0 323 aaPredicted RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 AGO3Q9H9G7 860 aaKnown RBP9.77□□□□□ -0.85
GPC6-202ENST00000617456 LY9Q9HBG7 655 aa9.77□□□□□ -0.85
GPC6-202ENST00000617456 FRMPD4Q14CM0 1322 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms