RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RIN2Q8WYP3 895 aaPredicted RBP12.56□□□□□ -0.4
PCDHGA9-202ENST00000616887 RUSC1Q9BVN2 902 aa12.56□□□□□ -0.4
PCDHGA9-202ENST00000616887 BHMT2Q9H2M3 363 aa12.56□□□□□ -0.4
PCDHGA9-202ENST00000616887 COL20A1Q9P218 1284 aa12.56□□□□□ -0.4
PCDHGA9-202ENST00000616887 CDC23Q9UJX2 597 aa12.56□□□□□ -0.4
PCDHGA9-202ENST00000616887 SFI1A8K8P3 1242 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 CIITAP33076 1130 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 ARHGAP25P42331 645 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 MAP9Q49MG5 647 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 COBLL1Q53SF7 1204 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 CYP26C1Q6V0L0 522 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 SMCR8Q8TEV9 937 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 NOC3LQ8WTT2 800 aaKnown RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 REEP2Q9BRK0 252 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 GCOM1H8Y6P7 765 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 TBC1D12O60347 775 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 FOSP01100 380 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 POLR2MP0CAP2 368 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 GMPSP49915 693 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 TRIM14Q14142 442 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 HAUS3Q68CZ6 603 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 IL31RAQ8NI17 732 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 MIEF2Q96C03 454 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 CCDC51Q96ER9 411 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 DNAJC7Q99615 494 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 EIF2AK1Q9BQI3 630 aaKnown RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 WRAP73Q9P2S5 460 aaPredicted RBP12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 CAPN11Q9UMQ6 739 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 CAPN7Q9Y6W3 813 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 SBF1O95248 1867 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 ZNF536O15090 1300 aa12.55□□□□□ -0.4
PCDHGA9-202ENST00000616887 DDX39AO00148 427 aaKnown RBP12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 TRAF5O00463 557 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 ASNSP08243 561 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 ARP10275 920 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 IBSPP21815 317 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 RPA1P27694 616 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 KCNA1Q09470 495 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 KIF4BQ2VIQ3 1234 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 TMTC1Q8IUR5 882 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 GBP3Q9H0R5 595 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 CD248Q9HCU0 757 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 MYO1FO00160 1098 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 NEBLO76041 1014 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 NDUFA10O95299 355 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 ELF1P32519 619 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 GIT2Q14161 759 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 FAM114A1Q8IWE2 563 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 HOOK2Q96ED9 719 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
PCDHGA9-202ENST00000616887 H0YHG0 523 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 MYBP10242 640 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 HERVK_113P62684 666 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 LRRC63Q05C16 580 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 MTMR2Q13614 643 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 TPH2Q8IWU9 490 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 PRPF38AQ8NAV1 312 aaKnown RBP12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 CHURC1Q8WUH1 139 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 N4BP2L2Q92802 583 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 DYDC2Q96IM9 177 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 SLC24A3Q9HC58 644 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 HACL1Q9UJ83 578 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 EPN1Q9Y6I3 576 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 RCCD1A6NED2 376 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 TBX3O15119 743 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 CYP3A4P08684 503 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 LMNB1P20700 586 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 HOXD13P35453 343 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 CYP27A1Q02318 531 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 BIRC2Q13490 618 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 NEDD9Q14511 834 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 CCDC65Q8IXS2 484 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 BCAS4Q8TDM0 211 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
PCDHGA9-202ENST00000616887 KCTD10Q9H3F6 313 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms