RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 SNAP23O00161 211 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 MT-ND3P03897 115 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 FBXL13Q8NEE6 735 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 SAMSN1Q9NSI8 373 aaKnown RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 RMDN3Q96TC7 470 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 HAUS4Q9H6D7 363 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 PCDHA6Q9UN73 950 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 PCDHA8Q9Y5H6 950 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 A6NNZ2 444 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 RASGRF1Q13972 1273 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 TUBB8Q3ZCM7 444 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 MRPL47Q9HD33 250 aaKnown RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 SH2B2O14492 632 aaPredicted RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 NMT2O60551 498 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 C11orf57Q6ZUT1 292 aaPredicted RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 FAM160B2Q86V87 743 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 BCAS4Q8TDM0 211 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 HIP1RO75146 1068 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 CYP27A1Q02318 531 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 ZNF568Q3ZCX4 644 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 TMEM259Q4ZIN3 620 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 FBXO18Q8NFZ0 1043 aa20.12■□□□□ 0.81
GABPB1-212ENST00000615671 ZNF335Q9H4Z2 1342 aaPredicted RBP20.12■□□□□ 0.81
GABPB1-212ENST00000615671 MAN2A1Q16706 1144 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 EDEM3Q9BZQ6 932 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 PIK3R2O00459 728 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 ADORA2BP29275 332 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 TBCCQ15814 346 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 FSD1LQ9BXM9 530 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 Q9H521 79 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 NHEJ1Q9H9Q4 299 aaPredicted RBP20.11■□□□□ 0.81
GABPB1-212ENST00000615671 HEY1Q9Y5J3 304 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 STXBP2Q15833 593 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 SYNE4Q8N205 404 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 ZNF513Q8N8E2 541 aaPredicted RBP20.11■□□□□ 0.81
GABPB1-212ENST00000615671 EIF4A3P38919 411 aaKnown RBP20.11■□□□□ 0.81
GABPB1-212ENST00000615671 OCRLQ01968 901 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 RBM6P78332 1123 aaKnown RBP20.11■□□□□ 0.81
GABPB1-212ENST00000615671 DRP2Q13474 957 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 ART3Q13508 389 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 SMIM5Q71RC9 77 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
GABPB1-212ENST00000615671 EEF1B2P24534 225 aaKnown RBP20.1■□□□□ 0.81
GABPB1-212ENST00000615671 DHTKD1Q96HY7 919 aaPredicted RBP20.1■□□□□ 0.81
GABPB1-212ENST00000615671 ARHGEF37A1IGU5 675 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 NCLNQ969V3 563 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 AK8Q96MA6 479 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 FAM213AQ9BRX8 229 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 HEMGNQ9BXL5 484 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 PPP6R2O75170 966 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 EN1Q05925 392 aaPredicted RBP20.1■□□□□ 0.81
GABPB1-212ENST00000615671 TMC4Q7Z404 712 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 NSUN7Q8NE18 718 aaKnown RBP20.1■□□□□ 0.81
GABPB1-212ENST00000615671 TRPC7Q9HCX4 862 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 HPCAL4Q9UM19 191 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 SLC16A4O15374 487 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 GNAT1P11488 350 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 COA1Q9GZY4 146 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 TSPY1Q01534 308 aa20.1■□□□□ 0.81
GABPB1-212ENST00000615671 CAPRIN1Q14444 709 aaKnown RBP20.1■□□□□ 0.81
GABPB1-212ENST00000615671 INSRP06213 1382 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 CYFIP1Q7L576 1253 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 KLHL8Q9P2G9 620 aaPredicted RBP20.09■□□□□ 0.81
GABPB1-212ENST00000615671 KITP10721 976 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 KDELC2Q7Z4H8 507 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 MAGEF1Q9HAY2 307 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 ATP6V0A4Q9HBG4 840 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 EPS15L1Q9UBC2 864 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 GCFC2P16383 781 aaKnown RBP20.09■□□□□ 0.81
GABPB1-212ENST00000615671 RUNDC3BQ96NL0 473 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 YIPF2Q9BWQ6 316 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 UPP2O95045 317 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 ZNF667Q5HYK9 610 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 TBC1D9BQ66K14 1250 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 COPRSQ9NQ92 184 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 TMEM260Q9NX78 707 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 CLDN3O15551 220 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 RPSAP08865 295 aaKnown RBP20.09■□□□□ 0.81
GABPB1-212ENST00000615671 SLC39A14Q15043 492 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 NDUFAF2Q8N183 169 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 TCP11Q8WWU5 503 aa20.09■□□□□ 0.81
GABPB1-212ENST00000615671 PIP4K2CQ8TBX8 421 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 CCDC138Q96M89 665 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 PPP1R9AQ9ULJ8 1098 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 CFAP43Q8NDM7 1665 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L15C9J2P7 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L11C9JVI0 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L18D6R9N7 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L22D6RA61 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L19D6RCP7 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 USP17L20D6RJB6 530 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 PPFIA2O75334 1257 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 CPB1P15086 417 aa20.08■□□□□ 0.81
GABPB1-212ENST00000615671 GPC3P51654 580 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms