RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 SUMO1P63165 101 aaKnown RBP3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 SERINC3Q13530 473 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 LONRF2Q1L5Z9 754 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 TRMT10BQ6PF06 316 aaKnown RBP3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 LBX2Q6XYB7 198 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 POLNQ7Z5Q5 900 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 IFNL3Q8IZI9 196 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 NUDT10Q8NFP7 164 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 OSBP2Q969R2 916 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 NUDT11Q96G61 164 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 FAM89AQ96GI7 184 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 SLC6A20Q9NP91 592 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 HSPBP1Q9NZL4 362 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 MYOTQ9UBF9 498 aa3.94□□□□□ -1.78
HMGB1P24-202ENST00000615653 TMEM191CA6NGB0 347 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 AQP7O14520 342 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 COL6A1P12109 1028 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 GTF2F1P35269 517 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 SSRP1Q08945 709 aaKnown RBP3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 RBL2Q08999 1139 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 SPIRE1Q08AE8 756 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 NTRK3Q16288 839 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 SYCE2Q6PIF2 218 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 OTOP3Q7RTS5 596 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 MKL1Q969V6 931 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 TOE1Q96GM8 510 aaKnown RBP3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 IPO9Q96P70 1041 aaKnown RBP3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 TMEM209Q96SK2 561 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 ALG1Q9BT22 464 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 BRIP1Q9BX63 1249 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 CDIP1Q9H305 208 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 ASH2LQ9UBL3 628 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 SLC30A1Q9Y6M5 507 aa3.93□□□□□ -1.78
HMGB1P24-202ENST00000615653 TRBV23-1A0A0A0MS06 115 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 FAM47E-STBD1D6RA91 191 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 ADCY3O60266 1144 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 MSCO60682 206 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 KLHL18O94889 574 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 GNAT1P11488 350 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 RASA3Q14644 834 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 HABP4Q5JVS0 413 aaKnown RBP3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 TEPPQ6URK8 271 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 Q6ZUG5 572 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 ZBTB38Q8NAP3 1195 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 UHMK1Q8TAS1 419 aaKnown RBP3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 PTPRN2Q92932 1015 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 AJUBAQ96IF1 538 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 DEPDC7Q96QD5 511 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 CDC6Q99741 560 aa3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 PDGFDQ9GZP0 370 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P24-202ENST00000615653 WNT9AO14904 365 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 NUDT3O95989 172 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 SOD2P04179 222 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 APPP05067 770 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 CDK4P11802 303 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 CDK11BP21127 795 aaKnown RBP3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 PROZP22891 400 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 LAIR1Q6GTX8 287 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 KCNT2Q6UVM3 1135 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 SPATC1Q76KD6 591 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 RPUSD2Q8IZ73 545 aaKnown RBP3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 ARRDC4Q8NCT1 418 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 PIP4K2CQ8TBX8 421 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 NEIL1Q96FI4 390 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 AURKAIP1Q9NWT8 199 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 CDK11AQ9UQ88 783 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 SHROOM4Q9ULL8 1493 aa3.91□□□□□ -1.78
HMGB1P24-202ENST00000615653 LMNAP02545 664 aaKnown RBP3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 LRG1P02750 347 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 CHGBP05060 677 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 CTGFP29279 349 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 CSF2RBP32927 897 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 GABREP78334 506 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 PAK1Q13153 545 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 YOD1Q5VVQ6 348 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 MTDHQ86UE4 582 aaKnown RBP3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 SREK1Q8WXA9 508 aaKnown RBP3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 JAM3Q9BX67 310 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 KRTAP1-5Q9BYS1 174 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 SNTG2Q9NY99 539 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 CEP72Q9P209 647 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 PPARGC1AQ9UBK2 798 aaKnown RBP3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 PFDN2Q9UHV9 154 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 REXO2Q9Y3B8 237 aaKnown RBP3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 KDM2BQ8NHM5 1336 aa3.9□□□□□ -1.79
HMGB1P24-202ENST00000615653 CCDC163A0A0D9SF12 145 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 CCDC85CA6NKD9 419 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 SLC27A2O14975 620 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 GSTA4O15217 222 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 EFCAB14O75071 495 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 PEX11BO96011 259 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 C6orf222P0C671 652 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 HSP90B1P14625 803 aaKnown RBP3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 ZNF37AP17032 561 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 EPHA5P54756 1037 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 TUSC3Q13454 348 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 VASNQ6EMK4 673 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 MICALCLQ6ZW33 695 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 KCTD1Q719H9 257 aa3.89□□□□□ -1.79
HMGB1P24-202ENST00000615653 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms