RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 HDAC4P56524 1084 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 EIF2B5Q13144 721 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 TBX2Q13207 712 aaPredicted RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 SNCBQ16143 134 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 C12orf60Q5U649 245 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 TMC6Q7Z403 805 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 VSTM4Q8IW00 320 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 CMTR1Q8N1G2 835 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 SRBD1Q8N5C6 995 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 WDR66Q8TBY9 1149 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 FAM71BQ8TC56 605 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 DHTKD1Q96HY7 919 aaPredicted RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 TSC22D3Q99576 134 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 TCHPQ9BT92 498 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 SEZ6LQ9BYH1 1024 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 BRD8Q9H0E9 1235 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 CSRNP2Q9H175 543 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 CD248Q9HCU0 757 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 SH3GLB2Q9NR46 395 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 PAPOLBQ9NRJ5 636 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 FANCLQ9NW38 375 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 DACH1Q9UI36 760 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 PAIP2BQ9ULR5 123 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 RTCBQ9Y3I0 505 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 CAPN7Q9Y6W3 813 aa7.35□□□□□ -1.23
CDKAL1-204ENST00000613575 WNK3Q9BYP7 1800 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 BCORQ6W2J9 1755 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 LRRC10BA6NIK2 292 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 EFCAB8A8MWE9 144 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 UPP2O95045 317 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 RPSAP08865 295 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 SFPQP23246 707 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 KLRK1P26718 216 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 ATP2C1P98194 919 aaPredicted RBP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 PDE4BQ07343 736 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 FXNQ16595 210 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 PFKFB3Q16875 520 aaPredicted RBP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 EARS2Q5JPH6 523 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 THEMIS2Q5TEJ8 643 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 MIS18BP1Q6P0N0 1132 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 PACS1Q6VY07 963 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 PTF1AQ7RTS3 328 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 UBE2Q1Q7Z7E8 422 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 FCHSD1Q86WN1 690 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 GPR161Q8N6U8 529 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 PPP1R14BQ96C90 147 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 MPP4Q96JB8 637 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 GSDMAQ96QA5 445 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 MED15Q96RN5 788 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 CORO1BQ9BR76 489 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 PYM1Q9BRP8 204 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 KLC4Q9NSK0 619 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 DNAI1Q9UI46 699 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 ZNF510Q9Y2H8 683 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 FAN1Q9Y2M0 1017 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 TMED5Q9Y3A6 229 aa7.34□□□□□ -1.23
CDKAL1-204ENST00000613575 COL4A1P02462 1669 aa7.34□□□□□ -1.24
CDKAL1-204ENST00000613575 CYP2D7A0A087X1C5 515 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 TMEM221A6NGB7 291 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 USP27XA6NNY8 438 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 NPHP1O15259 732 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 FOXN1O15353 648 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 MTRF1O75570 445 aaKnown RBP7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 PLEKHA8P1O95397 391 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 ADH1AP07327 375 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 SCG2P13521 617 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 BDNFP23560 247 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 SMARCA1P28370 1054 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 PRDX5P30044 214 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 ATICP31939 592 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 KIF5BP33176 963 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 NOVP48745 357 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 GNAQP50148 359 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 SMTNP53814 917 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 RELBQ01201 579 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 POU5F1Q01860 360 aaKnown RBP7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 IFFO1Q0D2I5 559 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 PTK7Q13308 1070 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 GRAPQ13588 217 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 MYBPC3Q14896 1274 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 NR1I3Q14994 352 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 RCN1Q15293 331 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 CCDC93Q567U6 631 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 ARL6IP4Q66PJ3 421 aaKnown RBP7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 ZNF772Q68DY9 489 aaPredicted RBP7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 GALNT17Q6IS24 598 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 Q6ZVU0 165 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 USP49Q70CQ1 688 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 B4GALNT4Q76KP1 1039 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 CYP2U1Q7Z449 544 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 RSPH3Q86UC2 560 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 LCA5Q86VQ0 697 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 TXNRD3Q86VQ6 643 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 TRIM50Q86XT4 487 aa7.33□□□□□ -1.24
CDKAL1-204ENST00000613575 GALNT15Q8N3T1 639 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms