RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SFNP31947 248 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 SLC26A2P50443 739 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 STAT5BP51692 787 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 JAK3P52333 1124 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 CHMP4BP1P59074 171 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 FAAP100Q0VG06 881 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 FAM160B1Q5W0V3 765 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 ADALQ6DHV7 355 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 SLFN12Q8IYM2 578 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 C7orf31Q8N865 590 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 RDM1Q8NG50 284 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 GOLPH3LQ9H4A5 285 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 PDLIM7Q9NR12 457 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 DISC1Q9NRI5 854 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 TMEM39AQ9NV64 488 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
SMAD4-217ENST00000611848 PCDHA7Q9UN72 937 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 PCDHA10Q9Y5I2 948 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 TCHHQ07283 1943 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 BACH1O14867 736 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 KIAA0355O15063 1070 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 B4GALT4O60513 344 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 NEMFO60524 1076 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 CAVIN2O95810 425 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 ATP2B1P20020 1258 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 FAM160A1Q05DH4 1040 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 CALCRLQ16602 461 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 RILPL1Q5EBL4 403 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 TTC38Q5R3I4 469 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 B3GNT9Q6UX72 402 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 TRIM50Q86XT4 487 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 KCNG4Q8TDN1 519 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 AFAP1L1Q8TED9 768 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 HAS1Q92839 578 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 PCYT2Q99447 389 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 PRDM5Q9NQX1 630 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-217ENST00000611848 ZNF302Q9NR11 478 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 HDAC6Q9UBN7 1215 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 GTF2IRD1Q9UHL9 959 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 USP25Q9UHP3 1055 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 TBX21Q9UL17 535 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 ZMYND8Q9ULU4 1186 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-217ENST00000611848 SAMM50Q9Y512 469 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 CLIC4Q9Y696 253 aa9.9□□□□□ -0.82
SMAD4-217ENST00000611848 C17orf102A2RUQ5 167 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 H0YGN5 161 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 WNT7AO00755 349 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 CHMP2AO43633 222 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 ADCY5O95622 1261 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 GNAT1P11488 350 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 MCM7P33993 719 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 ME1P48163 572 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 PPP2R5CQ13362 524 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 PTGISQ16647 500 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SWSAP1Q6NVH7 229 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 CCDC73Q6ZRK6 1079 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 MIER3Q7Z3K6 550 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 CCDC60Q8IWA6 550 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 CKAP2LQ8IYA6 745 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 GJA10Q969M2 543 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 TRPV6Q9H1D0 765 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 UNC45AQ9H3U1 944 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 RNPEPQ9H4A4 650 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 TRMT13Q9NUP7 481 aaKnown RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 NOD1Q9Y239 953 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 ZKSCAN5Q9Y2L8 839 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 MAFBQ9Y5Q3 323 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 NRCAMQ92823 1304 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 TRIM43BA6NCK2 446 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SPTLC2O15270 562 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 AP5Z1O43299 807 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 TIMP1P01033 207 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 RAG1P15918 1043 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 MSNP26038 577 aaKnown RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 HOXC8P31273 242 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SLC39A14Q15043 492 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 PLCB4Q15147 1175 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 ZNF174Q15697 407 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SASS6Q6UVJ0 657 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 SH3RF1Q7Z6J0 888 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 FMR1NBQ8N0W7 255 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 FSIP1Q8NA03 581 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 TRIM43Q96BQ3 446 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-217ENST00000611848 MTMR9Q96QG7 549 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 GABBR1Q9UBS5 961 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 VAV3Q9UKW4 847 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 PCDHA12Q9UN75 941 aa9.89□□□□□ -0.83
SMAD4-217ENST00000611848 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 RRN3P2A6NIE6 340 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 HBP1O60381 514 aa9.88□□□□□ -0.83
SMAD4-217ENST00000611848 SYN1P17600 705 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 328.4 ms