RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 AP1M1Q9BXS5 423 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 BRD8Q9H0E9 1235 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 MLXIPLQ9NP71 852 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
CTCFL-218ENST00000608440 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 NLRP5P59047 1200 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 LSAMPQ13449 338 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 MTMR3Q13615 1198 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DIS3L2Q8IYB7 885 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF507Q8TCN5 953 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 FAM192AQ9GZU8 254 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ARHGAP20Q9P2F6 1191 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 HSFX1Q9UBD0 423 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DAAM1Q9Y4D1 1078 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 SRPRBQ9Y5M8 271 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 SLIT2O94813 1529 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 SKIP12755 728 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 RASA1P20936 1047 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 CMPK2Q5EBM0 449 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 CCDC80Q76M96 950 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 TMC3Q7Z5M5 1100 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 RALYLQ86SE5 291 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 CCDC82Q8N4S0 544 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 WDR60Q8WVS4 1066 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 KCNN1Q92952 543 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DYDC2Q96IM9 177 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ARPC5LQ9BPX5 153 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 OXCT2Q9BYC2 517 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 AZI2Q9H6S1 392 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 PCDH18Q9HCL0 1135 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DENND2AQ9ULE3 1009 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF711Q9Y462 761 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 A0A1W2PQC6 194 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 MAGEA13PA6NCF6 341 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 TRIM43BA6NCK2 446 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 MAGEB3O15480 346 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 PALMO75781 387 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 PMS1P54277 932 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 TFCP2Q12800 502 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DIXDC1Q155Q3 683 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 KBTBD3Q8NAB2 608 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 SCG3Q8WXD2 468 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 DNAJC1Q96KC8 554 aaKnown RBP13.63□□□□□ -0.23
CTCFL-218ENST00000608440 NACA2Q9H009 215 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 RXFP1Q9HBX9 757 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 ARHGEF38Q9NXL2 777 aa13.63□□□□□ -0.23
CTCFL-218ENST00000608440 MYH7BA7E2Y1 1941 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 GLI3P10071 1580 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 A0A0J9YVX5 310 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 A6NJR5 290 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 PRCPP42785 496 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 MMP13P45452 471 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 SLCO1A2P46721 670 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 CUL1Q13616 776 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 PDIA6Q15084 440 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 TTYH3Q9C0H2 523 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 SPATA31A5Q5VU36 1347 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 SPATA31A7Q8IWB4 1347 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 ITGA2BP08514 1039 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
CTCFL-218ENST00000608440 HSPA1LP34931 641 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-218ENST00000608440 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 CYP4X1Q8N118 509 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 LRRC8CQ8TDW0 803 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 CTNNBL1Q8WYA6 563 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-218ENST00000608440 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
CTCFL-218ENST00000608440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.23
CTCFL-218ENST00000608440 ZNF180Q9UJW8 692 aa13.62□□□□□ -0.23
CTCFL-218ENST00000608440 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 LRP6O75581 1613 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 LSM1O15116 133 aaKnown RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 RANBP6O60518 1105 aaKnown RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 UNC5CO95185 931 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 AFPP02771 609 aaKnown RBP13.61□□□□□ -0.23
CTCFL-218ENST00000608440 MLH1P40692 756 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 SLC15A3Q8IY34 581 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 USP38Q8NB14 1042 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 ATP8B4Q8TF62 1192 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 DHRS1Q96LJ7 313 aa13.61□□□□□ -0.23
CTCFL-218ENST00000608440 INIPQ9NRY2 104 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms