RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 LRWD1Q9UFC0 647 aa16■□□□□ 0.15
CTSA-219ENST00000607841 COL1A2P08123 1366 aa16■□□□□ 0.15
CTSA-219ENST00000607841 POTEMA6NI47 508 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 TREHO43280 583 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 ZNF862O60290 1169 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 F13A1P00488 732 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 RPLP2P05387 115 aaKnown RBP15.99■□□□□ 0.15
CTSA-219ENST00000607841 IGBP1P78318 339 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 ADAM17P78536 824 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 ZNF200P98182 395 aaPredicted RBP15.99■□□□□ 0.15
CTSA-219ENST00000607841 UGCGQ16739 394 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 PRPF38BQ5VTL8 546 aaKnown RBP15.99■□□□□ 0.15
CTSA-219ENST00000607841 HAUS3Q68CZ6 603 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 TAF2Q6P1X5 1199 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
CTSA-219ENST00000607841 SERINC5Q86VE9 423 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 DYDC2Q96IM9 177 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 HSD17B14Q9BPX1 270 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 LXNQ9BS40 222 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
CTSA-219ENST00000607841 MBLAC1A4D2B0 266 aaPredicted RBP15.98■□□□□ 0.15
CTSA-219ENST00000607841 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 SLITRK3O94933 977 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 HIC1Q14526 733 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
CTSA-219ENST00000607841 FAM173BQ6P4H8 233 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 OTUD6AQ7L8S5 288 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 RSPH3Q86UC2 560 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 TPH2Q8IWU9 490 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 TMEM199Q8N511 208 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
CTSA-219ENST00000607841 NOC4LQ9BVI4 516 aaKnown RBP15.98■□□□□ 0.15
CTSA-219ENST00000607841 NIFKQ9BYG3 293 aaKnown RBP15.98■□□□□ 0.15
CTSA-219ENST00000607841 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 TUFT1Q9NNX1 390 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
CTSA-219ENST00000607841 SEPT9Q9UHD8 586 aaPredicted RBP15.98■□□□□ 0.15
CTSA-219ENST00000607841 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 MAGEB2O15479 319 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 CAND2O75155 1236 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 LYPLA2O95372 231 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 BRD1O95696 1058 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 PKP1Q13835 747 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 CTTNQ14247 550 aaKnown RBP15.97■□□□□ 0.15
CTSA-219ENST00000607841 MARCH8Q5T0T0 291 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 KRT79Q5XKE5 535 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 ATL3Q6DD88 541 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 MFSD5Q6N075 450 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 MTHFD1LQ6UB35 978 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 IGSF22Q8N9C0 903 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 AK8Q96MA6 479 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 CTAGE1Q96RT6 745 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 POLR3CQ9BUI4 534 aaPredicted RBP15.97■□□□□ 0.15
CTSA-219ENST00000607841 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 PCDHA2Q9Y5H9 948 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 ATP6V1DQ9Y5K8 247 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
CTSA-219ENST00000607841 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 PARNO95453 639 aaKnown RBP15.96■□□□□ 0.15
CTSA-219ENST00000607841 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.15
CTSA-219ENST00000607841 MUTP22033 750 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 KLRC1P26715 233 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 RPA1P27694 616 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 YWHABP31946 246 aaKnown RBP15.96■□□□□ 0.15
CTSA-219ENST00000607841 THPOP40225 353 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 NUCB2P80303 420 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
CTSA-219ENST00000607841 RBL2Q08999 1139 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 EXOC8Q8IYI6 725 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 BADQ92934 168 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 USP28Q96RU2 1077 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 CFAP45Q9UL16 551 aa15.96■□□□□ 0.15
CTSA-219ENST00000607841 SMIM35A0A1B0GVV1 85 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 STBD1O95210 358 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 CKBP12277 381 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 SELPP16109 830 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 ITGB8P26012 769 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 TMOD1P28289 359 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 CYP2C18P33260 490 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 LONP1P36776 959 aaKnown RBP15.95■□□□□ 0.14
CTSA-219ENST00000607841 CCT6AP40227 531 aaKnown RBP15.95■□□□□ 0.14
CTSA-219ENST00000607841 MDM2Q00987 491 aaPredicted RBP15.95■□□□□ 0.14
CTSA-219ENST00000607841 TBC1D8BQ0IIM8 1120 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 PTPAQ15257 358 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 IL17AQ16552 155 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 ANO5Q75V66 913 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 CATSPER3Q86XQ3 398 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 NME8Q8N427 588 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 SNX29Q8TEQ0 813 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 TRAPPC12Q8WVT3 735 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 DHX38Q92620 1227 aaKnown RBP15.95■□□□□ 0.14
CTSA-219ENST00000607841 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
CTSA-219ENST00000607841 NACC1Q96RE7 527 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 JPH2Q9BR39 696 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms