RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ATP4AP20648 1035 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 KCNJ6P48051 423 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 SLC26A2P50443 739 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 TCTN1Q2MV58 587 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 TAF2Q6P1X5 1199 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MOXD1Q6UVY6 613 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
TUBE1-208ENST00000604743 FAM184AQ8NB25 1140 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 TIFAQ96CG3 184 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 SIP14410 1827 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MBLAC1A4D2B0 266 aaPredicted RBP16.27■□□□□ 0.2
TUBE1-208ENST00000604743 CAND2O75155 1236 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 PSMD10O75832 226 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 TMEM62Q0P6H9 643 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 DBF4BQ8NFT6 615 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 ETNPPLQ8TBG4 499 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 MBOAT7Q96N66 472 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 TBC1D32Q96NH3 1257 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 NKX2-4Q9H2Z4 354 aa16.27■□□□□ 0.2
TUBE1-208ENST00000604743 TTYH1Q9H313 450 aaPredicted RBP16.27■□□□□ 0.2
TUBE1-208ENST00000604743 MAFBQ9Y5Q3 323 aaPredicted RBP16.27■□□□□ 0.2
TUBE1-208ENST00000604743 BAIAP3O94812 1187 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 CHRNA1P02708 482 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 MYOGP15173 224 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 KLRC1P26715 233 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 JAK3P52333 1124 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 HMGN5P82970 282 aaKnown RBP16.26■□□□□ 0.19
TUBE1-208ENST00000604743 IKBKEQ14164 716 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
TUBE1-208ENST00000604743 RAB30Q15771 203 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 MTHFD1LQ6UB35 978 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 TMCO2Q7Z6W1 182 aaPredicted RBP16.26■□□□□ 0.19
TUBE1-208ENST00000604743 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
TUBE1-208ENST00000604743 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
TUBE1-208ENST00000604743 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
TUBE1-208ENST00000604743 GCFC2P16383 781 aaKnown RBP16.25■□□□□ 0.19
TUBE1-208ENST00000604743 ATP2B1P20020 1258 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 SFNP31947 248 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 WDR5P61964 334 aaKnown RBP16.25■□□□□ 0.19
TUBE1-208ENST00000604743 UGCGQ16739 394 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 ZNF484Q5JVG2 852 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 PPP4R3AQ6IN85 833 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 BBXQ8WY36 941 aaPredicted RBP16.25■□□□□ 0.19
TUBE1-208ENST00000604743 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 SLC9A7Q96T83 725 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 YBX2Q9Y2T7 364 aaKnown RBP16.25■□□□□ 0.19
TUBE1-208ENST00000604743 PCDHA2Q9Y5H9 948 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 CDY2AQ9Y6F7 541 aa16.25■□□□□ 0.19
TUBE1-208ENST00000604743 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 ABHD14A-ACY1A0A1B0GW23 586 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 M0QZ92 97 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 GHRP10912 638 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 DEFB103AP81534 67 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 MRPS6P82932 125 aaKnown RBP16.24■□□□□ 0.19
TUBE1-208ENST00000604743 PRKCEQ02156 737 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
TUBE1-208ENST00000604743 PLEKHG4Q58EX7 1191 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 SEPT8Q92599 483 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 TMX3Q96JJ7 454 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 NRBP2Q9NSY0 501 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 COL1A2P08123 1366 aa16.24■□□□□ 0.19
TUBE1-208ENST00000604743 ZNF862O60290 1169 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 OATP04181 439 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 MGAT3Q09327 533 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 IER5Q5VY09 327 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 FAM117BQ6P1L5 589 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
TUBE1-208ENST00000604743 RPAINQ86UA6 219 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 HERC6Q8IVU3 1022 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 METTL13Q8N6R0 699 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 BANK1Q8NDB2 785 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 PHOSPHO2Q8TCD6 241 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 HAS1Q92839 578 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 FAM20AQ96MK3 541 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 PPP1R16BQ96T49 567 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
TUBE1-208ENST00000604743 ZBED2Q9BTP6 218 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 IFIH1Q9BYX4 1025 aaKnown RBP16.23■□□□□ 0.19
TUBE1-208ENST00000604743 SLC28A3Q9HAS3 691 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 KCNMB3Q9NPA1 279 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 GINS2Q9Y248 185 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 PCDHA11Q9Y5I1 949 aa16.23■□□□□ 0.19
TUBE1-208ENST00000604743 TMEM265A0A087WTH1 108 aa16.22■□□□□ 0.19
TUBE1-208ENST00000604743 SMIM35A0A1B0GVV1 85 aa16.22■□□□□ 0.19
TUBE1-208ENST00000604743 ZBTB42B2RXF5 422 aa16.22■□□□□ 0.19
TUBE1-208ENST00000604743 KIF28PB7ZC32 967 aa16.22■□□□□ 0.19
TUBE1-208ENST00000604743 EML1O00423 815 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms