RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
RNF40-212ENST00000602784 ZSWIM4Q9H7M6 989 aa15.58■□□□□ 0.08
RNF40-212ENST00000602784 KAT6AQ92794 2004 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 POTEMA6NI47 508 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 SLITRK3O94933 977 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 STBD1O95210 358 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 LYPLA2O95372 231 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 TIMP1P01033 207 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 OATP04181 439 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 RPLP2P05387 115 aaKnown RBP15.57■□□□□ 0.08
RNF40-212ENST00000602784 PRKCEQ02156 737 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 RBL2Q08999 1139 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 IL17AQ16552 155 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 MARCH8Q5T0T0 291 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 FAM173BQ6P4H8 233 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 BANK1Q8NDB2 785 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 ERMNQ8TAM6 284 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 CAGE1Q8TC20 777 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 ZNF396Q96N95 335 aaPredicted RBP15.57■□□□□ 0.08
RNF40-212ENST00000602784 POLR3CQ9BUI4 534 aaPredicted RBP15.57■□□□□ 0.08
RNF40-212ENST00000602784 NOC4LQ9BVI4 516 aaKnown RBP15.57■□□□□ 0.08
RNF40-212ENST00000602784 TUFT1Q9NNX1 390 aa15.57■□□□□ 0.08
RNF40-212ENST00000602784 PRDM5Q9NQX1 630 aaPredicted RBP15.57■□□□□ 0.08
RNF40-212ENST00000602784 ZBTB42B2RXF5 422 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 H0YGN5 161 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 TREHO43280 583 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 CAND2O75155 1236 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 CYP2C9P11712 490 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 RAG1P15918 1043 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 MUTP22033 750 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 RPA1P27694 616 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 DDIT3P35638 169 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 ZNF200P98182 395 aaPredicted RBP15.56■□□□□ 0.08
RNF40-212ENST00000602784 BFSP2Q13515 415 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 PTPAQ15257 358 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 TAF2Q6P1X5 1199 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 RPAINQ86UA6 219 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 CCDC155Q8N6L0 562 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 DYDC2Q96IM9 177 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 LXNQ9BS40 222 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 HIPK3Q9H422 1215 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 RGL1Q9NZL6 768 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
RNF40-212ENST00000602784 LRWD1Q9UFC0 647 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 TUBE1Q9UJT0 475 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 ZMYND8Q9ULU4 1186 aaPredicted RBP15.56■□□□□ 0.08
RNF40-212ENST00000602784 PPME1Q9Y570 386 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
RNF40-212ENST00000602784 TRIP12Q14669 1992 aaPredicted RBP15.55■□□□□ 0.08
RNF40-212ENST00000602784 MAGEB2O15479 319 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 SPATA31C1P0DKV0 1188 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 XRCC6P12956 609 aaKnown RBP eCLIP15.55■□□□□ 0.08
RNF40-212ENST00000602784 NASPP49321 788 aaPredicted RBP15.55■□□□□ 0.08
RNF40-212ENST00000602784 SLC39A14Q15043 492 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 TARBP2Q15633 366 aaKnown RBP15.55■□□□□ 0.08
RNF40-212ENST00000602784 HAUS3Q68CZ6 603 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 OTUD6AQ7L8S5 288 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 TPH2Q8IWU9 490 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 AK8Q96MA6 479 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 USP28Q96RU2 1077 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 ZDHHC9Q9Y397 364 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 PCDHA2Q9Y5H9 948 aa15.55■□□□□ 0.08
RNF40-212ENST00000602784 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 SLC26A4O43511 780 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 SYN1P17600 705 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 ITGB8P26012 769 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 KLRC1P26715 233 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 IGBP1P78318 339 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 NUCB2P80303 420 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 CYP4A11Q02928 519 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 CTTNQ14247 550 aaKnown RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 TRIM71Q2Q1W2 868 aaKnown RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 FOXD4L5Q5VV16 416 aaPredicted RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 MFSD5Q6N075 450 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 MTHFD1LQ6UB35 978 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 ANO5Q75V66 913 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 CATSPER3Q86XQ3 398 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 KCTD17Q8N5Z5 321 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 RETREG2Q8NC44 543 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 FOXD4L4Q8WXT5 416 aaPredicted RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 DHX38Q92620 1227 aaKnown RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 LBHD1Q9BQE6 289 aaPredicted RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
RNF40-212ENST00000602784 ANKEF1Q9NU02 776 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
RNF40-212ENST00000602784 ATP6V1DQ9Y5K8 247 aa15.54■□□□□ 0.08
RNF40-212ENST00000602784 SMIM35A0A1B0GVV1 85 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 VWA3AA6NCI4 1184 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 PARNO95453 639 aaKnown RBP15.53■□□□□ 0.08
RNF40-212ENST00000602784 YEATS4O95619 227 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 CKBP12277 381 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 YWHABP31946 246 aaKnown RBP15.53■□□□□ 0.08
RNF40-212ENST00000602784 LONP1P36776 959 aaKnown RBP15.53■□□□□ 0.08
RNF40-212ENST00000602784 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 RSPH3Q86UC2 560 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 EXOC8Q8IYI6 725 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 TRAPPC12Q8WVT3 735 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 NACC1Q96RE7 527 aa15.53■□□□□ 0.08
RNF40-212ENST00000602784 CEP89Q96ST8 783 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms