RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 RDM1Q8NG50 284 aa18.88■□□□□ 0.61
SSBP4-213ENST00000602088 TRAPPC12Q8WVT3 735 aa18.88■□□□□ 0.61
SSBP4-213ENST00000602088 HAS1Q92839 578 aa18.88■□□□□ 0.61
SSBP4-213ENST00000602088 MTIF3Q9H2K0 278 aaKnown RBP18.88■□□□□ 0.61
SSBP4-213ENST00000602088 FOXP1Q9H334 677 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-213ENST00000602088 GABBR1Q9UBS5 961 aa18.88■□□□□ 0.61
SSBP4-213ENST00000602088 WDR81Q562E7 1941 aa18.88■□□□□ 0.61
SSBP4-213ENST00000602088 ACTN1P12814 892 aa18.87■□□□□ 0.61
SSBP4-213ENST00000602088 FAM109BQ6ICB4 259 aaPredicted RBP18.87■□□□□ 0.61
SSBP4-213ENST00000602088 MIER3Q7Z3K6 550 aa18.87■□□□□ 0.61
SSBP4-213ENST00000602088 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
SSBP4-213ENST00000602088 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
SSBP4-213ENST00000602088 COL1A2P08123 1366 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 WNT7AO00755 349 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 ZNF484Q5JVG2 852 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 FAM26DQ5JW98 314 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 CKAP2LQ8IYA6 745 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-213ENST00000602088 ZBTB10Q96DT7 871 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 SLC4A7Q9Y6M7 1214 aa18.86■□□□□ 0.61
SSBP4-213ENST00000602088 ZBTB42B2RXF5 422 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 ZNF862O60290 1169 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 CTSHP09668 335 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 PPP2R5CQ13362 524 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 CNKSR3Q6P9H4 555 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 MTHFD1LQ6UB35 978 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 RSPH3Q86UC2 560 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 DNAJB3Q8WWF6 145 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 CHD9Q3L8U1 2897 aa18.85■□□□□ 0.61
SSBP4-213ENST00000602088 SMIM35A0A1B0GVV1 85 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 ZBBXA8MT70 800 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 GRXCR1A8MXD5 290 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 MARCH6O60337 910 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 BAIAP3O94812 1187 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 BAG4O95429 457 aaKnown RBP18.84■□□□□ 0.61
SSBP4-213ENST00000602088 CHRNA1P02708 482 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
SSBP4-213ENST00000602088 KLRC1P26715 233 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 GJB2P29033 226 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 UGCGQ16739 394 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 TCTN1Q2MV58 587 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 TRMT1LQ7Z2T5 733 aaKnown RBP18.84■□□□□ 0.61
SSBP4-213ENST00000602088 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 SLFN12Q8IYM2 578 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 NRBP2Q9NSY0 501 aa18.84■□□□□ 0.61
SSBP4-213ENST00000602088 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 RBAK-RBAKDNI3L0D1 243 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 EML1O00423 815 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 SLC34A2O95436 690 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 OATP04181 439 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 U2AF2P26368 475 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSBP4-213ENST00000602088 PRKCEQ02156 737 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 SPIRE1Q08AE8 756 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 MGAT3Q09327 533 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 CUL4AQ13619 759 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 GNL2Q13823 731 aaKnown RBP18.83■□□□□ 0.6
SSBP4-213ENST00000602088 CALCRLQ16602 461 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 PLEKHG4Q58EX7 1191 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 DBF4BQ8NFT6 615 aa18.83■□□□□ 0.6
SSBP4-213ENST00000602088 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-213ENST00000602088 NEMFO60524 1076 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 ATP2B1P20020 1258 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 DEFB123Q8N688 67 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 FAM49AQ9H0Q0 323 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-213ENST00000602088 PCDHA12Q9UN75 941 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 SMC3Q9UQE7 1217 aa18.82■□□□□ 0.6
SSBP4-213ENST00000602088 ABHD14A-ACY1A0A1B0GW23 586 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 STBD1O95210 358 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 C22orf31O95567 290 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
SSBP4-213ENST00000602088 DNAJB2P25686 324 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 MCM7P33993 719 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 MRPS6P82932 125 aaKnown RBP18.81■□□□□ 0.6
SSBP4-213ENST00000602088 IKBKEQ14164 716 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 XKR3Q5GH77 459 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 IER5Q5VY09 327 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 Q7L0L9 218 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 NME8Q8N427 588 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 BANK1Q8NDB2 785 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 PHOSPHO2Q8TCD6 241 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
SSBP4-213ENST00000602088 EVPLQ92817 2033 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 EFCAB14O75071 495 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 PBX2P40425 430 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 WDR5P61964 334 aaKnown RBP18.8■□□□□ 0.6
SSBP4-213ENST00000602088 PSMC5P62195 406 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 ORC2Q13416 577 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-213ENST00000602088 EPHA7Q15375 998 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
SSBP4-213ENST00000602088 NIFKQ9BYG3 293 aaKnown RBP18.8■□□□□ 0.6
SSBP4-213ENST00000602088 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms