RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 ZNF862O60290 1169 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 NBNO60934 754 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 CXCL10P02778 98 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 U2AF2P26368 475 aaKnown RBP eCLIP16.1■□□□□ 0.17
PSMC4-205ENST00000601194 UGCGQ16739 394 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 OTOP2Q7RTS6 562 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 ZBTB10Q96DT7 871 aa16.1■□□□□ 0.17
PSMC4-205ENST00000601194 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
PSMC4-205ENST00000601194 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
PSMC4-205ENST00000601194 SCN5AQ14524 2016 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 RSPH10B2B2RC85 870 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 NEMFO60524 1076 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 RSPH10BP0C881 870 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 SPIRE1Q08AE8 756 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
PSMC4-205ENST00000601194 FAM167AQ96KS9 214 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 COL1A2P08123 1366 aa16.09■□□□□ 0.17
PSMC4-205ENST00000601194 EML1O00423 815 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 OATP04181 439 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 CTSHP09668 335 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
PSMC4-205ENST00000601194 PRKCEQ02156 737 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 GNL2Q13823 731 aaKnown RBP16.08■□□□□ 0.16
PSMC4-205ENST00000601194 CALCRLQ16602 461 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 ZNF484Q5JVG2 852 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 FAM26DQ5JW98 314 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 FAM109BQ6ICB4 259 aaPredicted RBP16.08■□□□□ 0.16
PSMC4-205ENST00000601194 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 DNAJB3Q8WWF6 145 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 MTMR9Q96QG7 549 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
PSMC4-205ENST00000601194 MTIF3Q9H2K0 278 aaKnown RBP16.08■□□□□ 0.16
PSMC4-205ENST00000601194 PCDHA2Q9Y5H9 948 aa16.08■□□□□ 0.16
PSMC4-205ENST00000601194 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 SMIM35A0A1B0GVV1 85 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 RBAK-RBAKDNI3L0D1 243 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 MARCH6O60337 910 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
PSMC4-205ENST00000601194 RPLP2P05387 115 aaKnown RBP16.07■□□□□ 0.16
PSMC4-205ENST00000601194 ATP2B1P20020 1258 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 MCM7P33993 719 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 TRAPPC10P48553 1259 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
PSMC4-205ENST00000601194 GPR153Q6NV75 609 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 FAM49AQ9H0Q0 323 aaPredicted RBP16.07■□□□□ 0.16
PSMC4-205ENST00000601194 TMEM60Q9H2L4 133 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 KAT6AQ92794 2004 aa16.07■□□□□ 0.16
PSMC4-205ENST00000601194 STBD1O95210 358 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 C22orf31O95567 290 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 CHRNA1P02708 482 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 ACTN1P12814 892 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 KLRC1P26715 233 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 MGAT3Q09327 533 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 TCTN1Q2MV58 587 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 CNKSR3Q6P9H4 555 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 TRMT1LQ7Z2T5 733 aaKnown RBP16.06■□□□□ 0.16
PSMC4-205ENST00000601194 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 CEP131Q9UPN4 1083 aa16.06■□□□□ 0.16
PSMC4-205ENST00000601194 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 H3BQV1 296 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 K7ELQ4 463 aaPredicted RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 BAIAP3O94812 1187 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 PSMC5P62195 406 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 MRPS6P82932 125 aaKnown RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 PLEKHG4Q58EX7 1191 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 XKR3Q5GH77 459 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 NCAPH2Q6IBW4 605 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 NOL7Q9UMY1 257 aaKnown RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
PSMC4-205ENST00000601194 MYH9P35579 1960 aaKnown RBP16.05■□□□□ 0.16
PSMC4-205ENST00000601194 CHD9Q3L8U1 2897 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 GRXCR1A8MXD5 290 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 TXKP42681 527 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 QARSP47897 775 aaKnown RBP16.04■□□□□ 0.16
PSMC4-205ENST00000601194 NBR1Q14596 966 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 EPHA7Q15375 998 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 TARBP2Q15633 366 aaKnown RBP16.04■□□□□ 0.16
PSMC4-205ENST00000601194 ZNF174Q15697 407 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
PSMC4-205ENST00000601194 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 DBF4BQ8NFT6 615 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 SNX21Q969T3 373 aa16.04■□□□□ 0.16
PSMC4-205ENST00000601194 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
PSMC4-205ENST00000601194 NIFKQ9BYG3 293 aaKnown RBP16.04■□□□□ 0.16
PSMC4-205ENST00000601194 WRAP73Q9P2S5 460 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms