RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PRRX2Q99811 253 aa19.24■□□□□ 0.67
USE1-208ENST00000600970 PSTPIP2Q9H939 334 aa19.24■□□□□ 0.67
USE1-208ENST00000600970 IGSF9BQ9UPX0 1349 aa19.24■□□□□ 0.67
USE1-208ENST00000600970 USP34Q70CQ2 3546 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 PPFIA3O75145 1194 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 TCF15Q12870 199 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 PAK2Q13177 524 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 MB21D2Q8IYB1 491 aaPredicted RBP19.23■□□□□ 0.67
USE1-208ENST00000600970 FBXL6Q8N531 539 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 TRAPPC12Q8WVT3 735 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 PHF7Q9BWX1 381 aaPredicted RBP19.23■□□□□ 0.67
USE1-208ENST00000600970 CELF4Q9BZC1 486 aaKnown RBP19.23■□□□□ 0.67
USE1-208ENST00000600970 TMX1Q9H3N1 280 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 JADE2Q9NQC1 790 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 LRFN2Q9ULH4 789 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 PCDHA2Q9Y5H9 948 aa19.23■□□□□ 0.67
USE1-208ENST00000600970 MAFGO15525 162 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 DDAH1O94760 285 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 GSPT1P15170 499 aaKnown RBP19.22■□□□□ 0.67
USE1-208ENST00000600970 KIF5BP33176 963 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 UBE2SQ16763 222 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 SRBD1Q8N5C6 995 aaKnown RBP19.22■□□□□ 0.67
USE1-208ENST00000600970 TLE6Q9H808 572 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 LY9Q9HBG7 655 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 TRPC6Q9Y210 931 aa19.22■□□□□ 0.67
USE1-208ENST00000600970 PER2O15055 1255 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 RBM10P98175 930 aaKnown RBP19.21■□□□□ 0.67
USE1-208ENST00000600970 SIGLEC14Q08ET2 396 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 PLCB4Q15147 1175 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 TMEM266Q2M3C6 531 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 MICAL1Q8TDZ2 1067 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 RUFY2Q8WXA3 655 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 TNPO1Q92973 898 aaKnown RBP19.21■□□□□ 0.67
USE1-208ENST00000600970 RPGRIP1Q96KN7 1286 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 SNX27Q96L92 541 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 LZTS2Q9BRK4 669 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 AZI2Q9H6S1 392 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 JPH1Q9HDC5 661 aaPredicted RBP19.21■□□□□ 0.67
USE1-208ENST00000600970 SLC9A2Q9UBY0 812 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 PCDHA6Q9UN73 950 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 PCDHA8Q9Y5H6 950 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 KDM3AQ9Y4C1 1321 aa19.21■□□□□ 0.67
USE1-208ENST00000600970 IBSPP21815 317 aaPredicted RBP19.2■□□□□ 0.66
USE1-208ENST00000600970 SARSP49591 514 aaKnown RBP19.2■□□□□ 0.66
USE1-208ENST00000600970 UBE3AQ05086 875 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 SPOUT1Q5T280 376 aaKnown RBP19.2■□□□□ 0.66
USE1-208ENST00000600970 TTC22Q5TAA0 569 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 CMTR1Q8N1G2 835 aaKnown RBP19.2■□□□□ 0.66
USE1-208ENST00000600970 VN1R2Q8NFZ6 395 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 ATP8B4Q8TF62 1192 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 SUSD6Q92537 303 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 PCDHB7Q9Y5E2 793 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 PCDHB12Q9Y5F1 795 aa19.2■□□□□ 0.66
USE1-208ENST00000600970 SMIM35A0A1B0GVV1 85 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 ST18O60284 1047 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 MGEA5O60502 916 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 ATF7P17544 494 aaPredicted RBP19.19■□□□□ 0.66
USE1-208ENST00000600970 CHMLP26374 656 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 GNAQP50148 359 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 VCPP55072 806 aaKnown RBP19.19■□□□□ 0.66
USE1-208ENST00000600970 KRT76Q01546 638 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 NFX1Q12986 1120 aaKnown RBP19.19■□□□□ 0.66
USE1-208ENST00000600970 PLPPR4Q7Z2D5 763 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 NME8Q8N427 588 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 ASIC4Q96FT7 647 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 TLR9Q9NR96 1032 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 KCNH7Q9NS40 1196 aa19.19■□□□□ 0.66
USE1-208ENST00000600970 hCG_1642624A0A1W2PR95 340 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 PDE4AP27815 886 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 STAT5BP51692 787 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 ERVFC1P60507 584 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 ACTR2P61160 394 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 DUSP6Q16828 381 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 MTHFD1LQ6UB35 978 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 CDCA3Q99618 268 aaPredicted RBP19.18■□□□□ 0.66
USE1-208ENST00000600970 MXRA8Q9BRK3 442 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 ERVK-5Q9HDB9 667 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 AAASQ9NRG9 546 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 HCSTQ9UBK5 93 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 NFASCO94856 1347 aa19.18■□□□□ 0.66
USE1-208ENST00000600970 TBKBP1A7MCY6 615 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 FGF18O76093 207 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 RXRAP19793 462 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 FAM102BQ5T8I3 360 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 CYP2W1Q8TAV3 490 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 NEK1Q96PY6 1258 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 SDF4Q9BRK5 362 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 MTA3Q9BTC8 594 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 CDHR5Q9HBB8 845 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 RGS18Q9NS28 235 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 FAM86C1Q9NVL1 165 aa19.17■□□□□ 0.66
USE1-208ENST00000600970 NOC2LQ9Y3T9 749 aaKnown RBP19.17■□□□□ 0.66
USE1-208ENST00000600970 FSD2A1L4K1 749 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 FSCN2O14926 492 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 ARP10275 920 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 KLRC1P26715 233 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 AVPR2P30518 371 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms