RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RDM1Q8NG50 284 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 TRAPPC12Q8WVT3 735 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 HAS1Q92839 578 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 MTIF3Q9H2K0 278 aaKnown RBP18.88■□□□□ 0.61
SSBP4-204ENST00000597724 FOXP1Q9H334 677 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-204ENST00000597724 GABBR1Q9UBS5 961 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 WDR81Q562E7 1941 aa18.88■□□□□ 0.61
SSBP4-204ENST00000597724 ACTN1P12814 892 aa18.87■□□□□ 0.61
SSBP4-204ENST00000597724 FAM109BQ6ICB4 259 aaPredicted RBP18.87■□□□□ 0.61
SSBP4-204ENST00000597724 MIER3Q7Z3K6 550 aa18.87■□□□□ 0.61
SSBP4-204ENST00000597724 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
SSBP4-204ENST00000597724 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
SSBP4-204ENST00000597724 COL1A2P08123 1366 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 WNT7AO00755 349 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 ZNF484Q5JVG2 852 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 FAM26DQ5JW98 314 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 CKAP2LQ8IYA6 745 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 BBXQ8WY36 941 aaPredicted RBP18.86■□□□□ 0.61
SSBP4-204ENST00000597724 ZBTB10Q96DT7 871 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 SLC4A7Q9Y6M7 1214 aa18.86■□□□□ 0.61
SSBP4-204ENST00000597724 ZBTB42B2RXF5 422 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 ZNF862O60290 1169 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 CTSHP09668 335 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 PPP2R5CQ13362 524 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 CNKSR3Q6P9H4 555 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 MTHFD1LQ6UB35 978 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 RSPH3Q86UC2 560 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 DNAJB3Q8WWF6 145 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 CHD9Q3L8U1 2897 aa18.85■□□□□ 0.61
SSBP4-204ENST00000597724 SMIM35A0A1B0GVV1 85 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 ZBBXA8MT70 800 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 GRXCR1A8MXD5 290 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 MARCH6O60337 910 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 BAIAP3O94812 1187 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 BAG4O95429 457 aaKnown RBP18.84■□□□□ 0.61
SSBP4-204ENST00000597724 CHRNA1P02708 482 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 RPLP2P05387 115 aaKnown RBP18.84■□□□□ 0.61
SSBP4-204ENST00000597724 KLRC1P26715 233 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 GJB2P29033 226 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 UGCGQ16739 394 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 TCTN1Q2MV58 587 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 TRMT1LQ7Z2T5 733 aaKnown RBP18.84■□□□□ 0.61
SSBP4-204ENST00000597724 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 SLFN12Q8IYM2 578 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 NRBP2Q9NSY0 501 aa18.84■□□□□ 0.61
SSBP4-204ENST00000597724 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 RBAK-RBAKDNI3L0D1 243 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 EML1O00423 815 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 SLC34A2O95436 690 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 OATP04181 439 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 U2AF2P26368 475 aaKnown RBP eCLIP18.83■□□□□ 0.6
SSBP4-204ENST00000597724 PRKCEQ02156 737 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 SPIRE1Q08AE8 756 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 MGAT3Q09327 533 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 CUL4AQ13619 759 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 GNL2Q13823 731 aaKnown RBP18.83■□□□□ 0.6
SSBP4-204ENST00000597724 CALCRLQ16602 461 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 PLEKHG4Q58EX7 1191 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 DBF4BQ8NFT6 615 aa18.83■□□□□ 0.6
SSBP4-204ENST00000597724 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-204ENST00000597724 NEMFO60524 1076 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 ATP2B1P20020 1258 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 DEFB123Q8N688 67 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 FAM49AQ9H0Q0 323 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-204ENST00000597724 PCDHA12Q9UN75 941 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 SMC3Q9UQE7 1217 aa18.82■□□□□ 0.6
SSBP4-204ENST00000597724 ABHD14A-ACY1A0A1B0GW23 586 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 STBD1O95210 358 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 C22orf31O95567 290 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
SSBP4-204ENST00000597724 DNAJB2P25686 324 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 MCM7P33993 719 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 MRPS6P82932 125 aaKnown RBP18.81■□□□□ 0.6
SSBP4-204ENST00000597724 IKBKEQ14164 716 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 XKR3Q5GH77 459 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 IER5Q5VY09 327 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 Q7L0L9 218 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 NME8Q8N427 588 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 BANK1Q8NDB2 785 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 PHOSPHO2Q8TCD6 241 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
SSBP4-204ENST00000597724 EVPLQ92817 2033 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 EFCAB14O75071 495 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 PBX2P40425 430 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 WDR5P61964 334 aaKnown RBP18.8■□□□□ 0.6
SSBP4-204ENST00000597724 PSMC5P62195 406 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 ORC2Q13416 577 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-204ENST00000597724 EPHA7Q15375 998 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
SSBP4-204ENST00000597724 NIFKQ9BYG3 293 aaKnown RBP18.8■□□□□ 0.6
SSBP4-204ENST00000597724 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms