RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CNKSR3Q6P9H4 555 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 FBXO18Q8NFZ0 1043 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 RDM1Q8NG50 284 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 TRAPPC12Q8WVT3 735 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 TMX3Q96JJ7 454 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 FAM20AQ96MK3 541 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 GABBR1Q9UBS5 961 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 SAMM50Q9Y512 469 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 SLC4A7Q9Y6M7 1214 aa23.81■■□□□ 1.4
PNKP-209ENST00000596726 COL1A2P08123 1366 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 GRXCR1A8MXD5 290 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 TBX3O15119 743 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 BAIAP3O94812 1187 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 JAK3P52333 1124 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 GUCY1B3Q02153 619 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 TCTN1Q2MV58 587 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 Q7L0L9 218 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 BBXQ8WY36 941 aaPredicted RBP23.8■■□□□ 1.4
PNKP-209ENST00000596726 ZBTB10Q96DT7 871 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 PCDHA2Q9Y5H9 948 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 PTPRSQ13332 1948 aa23.8■■□□□ 1.4
PNKP-209ENST00000596726 ZBBXA8MT70 800 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 ZBTB42B2RXF5 422 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 CHMP2AO43633 222 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 MGAT3Q09327 533 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 SAFBQ15424 915 aaKnown RBP eCLIP23.79■■□□□ 1.4
PNKP-209ENST00000596726 ZNF484Q5JVG2 852 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 MTHFD1LQ6UB35 978 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 DEFB123Q8N688 67 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 FAM184AQ8NB25 1140 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 DNAJB3Q8WWF6 145 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 HAS1Q92839 578 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 OSBPL7Q9BZF2 842 aa23.79■■□□□ 1.4
PNKP-209ENST00000596726 MICAL3Q7RTP6 2002 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 ZNF862O60290 1169 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 CHRNA1P02708 482 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 RPLP2P05387 115 aaKnown RBP23.78■■□□□ 1.4
PNKP-209ENST00000596726 CTSHP09668 335 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 PLEKHG4Q58EX7 1191 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 MIER3Q7Z3K6 550 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 PBX4Q9BYU1 374 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 MTMR10Q9NXD2 777 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 VAV3Q9UKW4 847 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 LOXHD1Q8IVV2 1947 aa23.78■■□□□ 1.4
PNKP-209ENST00000596726 RBAK-RBAKDNI3L0D1 243 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 WNT7AO00755 349 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 DNAJB2P25686 324 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 KLRC1P26715 233 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 PPP2R5CQ13362 524 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 UGCGQ16739 394 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 RSPH3Q86UC2 560 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 POTEDQ86YR6 584 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 CKAP2LQ8IYA6 745 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 PHOSPHO2Q8TCD6 241 aa23.77■■□□□ 1.4
PNKP-209ENST00000596726 FOXP1Q9H334 677 aaPredicted RBP23.77■■□□□ 1.4
PNKP-209ENST00000596726 TMEM265A0A087WTH1 108 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 SMIM35A0A1B0GVV1 85 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 ABHD14A-ACY1A0A1B0GW23 586 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 PBX2P40425 430 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 MKRN4PQ13434 485 aaPredicted RBP23.76■■□□□ 1.39
PNKP-209ENST00000596726 ZNF697Q5TEC3 545 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 DBF4BQ8NFT6 615 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 FAM167AQ96KS9 214 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 SLC9A7Q96T83 725 aa23.76■■□□□ 1.39
PNKP-209ENST00000596726 TTYH1Q9H313 450 aaPredicted RBP23.76■■□□□ 1.39
PNKP-209ENST00000596726 EML1O00423 815 aa23.75■■□□□ 1.39
PNKP-209ENST00000596726 OATP04181 439 aa23.75■■□□□ 1.39
PNKP-209ENST00000596726 ATP2A2P16615 1042 aaKnown RBP23.75■■□□□ 1.39
PNKP-209ENST00000596726 WDR5P61964 334 aaKnown RBP23.75■■□□□ 1.39
PNKP-209ENST00000596726 FAM49AQ9H0Q0 323 aaPredicted RBP23.75■■□□□ 1.39
PNKP-209ENST00000596726 SEMA6BQ9H3T3 888 aa23.75■■□□□ 1.39
PNKP-209ENST00000596726 CHD9Q3L8U1 2897 aa23.75■■□□□ 1.39
PNKP-209ENST00000596726 EFCAB14O75071 495 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 STBD1O95210 358 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 MRPS6P82932 125 aaKnown RBP23.74■■□□□ 1.39
PNKP-209ENST00000596726 PRKCEQ02156 737 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 IKBKEQ14164 716 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 RAB30Q15771 203 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 SLFN12Q8IYM2 578 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 NME8Q8N427 588 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 TIFAQ96CG3 184 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 NRBP2Q9NSY0 501 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 CEP131Q9UPN4 1083 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 CDY2AQ9Y6F7 541 aa23.74■■□□□ 1.39
PNKP-209ENST00000596726 BAG4O95429 457 aaKnown RBP23.73■■□□□ 1.39
PNKP-209ENST00000596726 C22orf31O95567 290 aa23.73■■□□□ 1.39
PNKP-209ENST00000596726 SPIRE1Q08AE8 756 aa23.73■■□□□ 1.39
PNKP-209ENST00000596726 TRMT1LQ7Z2T5 733 aaKnown RBP23.73■■□□□ 1.39
PNKP-209ENST00000596726 KIAA0319LQ8IZA0 1049 aa23.73■■□□□ 1.39
PNKP-209ENST00000596726 SEPT8Q92599 483 aa23.73■■□□□ 1.39
PNKP-209ENST00000596726 MSRAQ9UJ68 235 aa23.73■■□□□ 1.39
PNKP-209ENST00000596726 PCDHA11Q9Y5I1 949 aa23.73■■□□□ 1.39
PNKP-209ENST00000596726 RABGGTBP53611 331 aa23.72■■□□□ 1.39
PNKP-209ENST00000596726 IER5Q5VY09 327 aa23.72■■□□□ 1.39
PNKP-209ENST00000596726 MTMR9Q96QG7 549 aa23.72■■□□□ 1.39
PNKP-209ENST00000596726 YBX2Q9Y2T7 364 aaKnown RBP23.72■■□□□ 1.39
PNKP-209ENST00000596726 KIF3AQ9Y496 699 aa23.72■■□□□ 1.39
PNKP-209ENST00000596726 KDM3AQ9Y4C1 1321 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 KIF28PB7ZC32 967 aa23.71■■□□□ 1.39
PNKP-209ENST00000596726 MARCH6O60337 910 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms