RNA–Protein interactions for RNA: ENST00000593932.1

SPTBN4-206, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-206ENST00000593932 IL27Q8NEV9 243 aa25.3■■□□□ 1.64
SPTBN4-206ENST00000593932 CCDC148Q8NFR7 591 aa25.3■■□□□ 1.64
SPTBN4-206ENST00000593932 ZNF577Q9BSK1 485 aa25.3■■□□□ 1.64
SPTBN4-206ENST00000593932 VPS54Q9P1Q0 977 aa25.3■■□□□ 1.64
SPTBN4-206ENST00000593932 SETQ01105 290 aaPredicted RBP25.29■■□□□ 1.64
SPTBN4-206ENST00000593932 IER5Q5VY09 327 aa25.29■■□□□ 1.64
SPTBN4-206ENST00000593932 FAM160B1Q5W0V3 765 aa25.29■■□□□ 1.64
SPTBN4-206ENST00000593932 CCDC60Q8IWA6 550 aaPredicted RBP25.29■■□□□ 1.64
SPTBN4-206ENST00000593932 CYP46A1Q9Y6A2 500 aa25.29■■□□□ 1.64
SPTBN4-206ENST00000593932 NLRC5Q86WI3 1866 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 TNFRSF10AO00220 468 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 KCNQ1P51787 676 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 TMEM62Q0P6H9 643 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 AAK1Q2M2I8 961 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 MTHFD1LQ6UB35 978 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 BICD2Q8TD16 824 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 AGO3Q9H9G7 860 aaKnown RBP25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 ZNF302Q9NR11 478 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 COG5Q9UP83 839 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 TRPV2Q9Y5S1 764 aa25.28■■□□□ 1.64
SPTBN4-206ENST00000593932 BMP1P13497 986 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 CD52P31358 61 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 CIITAP33076 1130 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 EPC2Q52LR7 807 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 PRR16Q569H4 304 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 MIS18BP1Q6P0N0 1132 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 ATP8B4Q8TF62 1192 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 SAMD11Q96NU1 681 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 UHRF1Q96T88 793 aaPredicted RBP25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 UPF3BQ9BZI7 483 aaKnown RBP25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 TM6SF1Q9BZW5 370 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 TBC1D22BQ9NU19 505 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 LOXHD1Q8IVV2 1947 aa25.27■■□□□ 1.64
SPTBN4-206ENST00000593932 TCF20Q9UGU0 1960 aaKnown RBP25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 SMIM35A0A1B0GVV1 85 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 M0QZ92 97 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 ENPP3O14638 875 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 HBP1O60381 514 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 SWSAP1Q6NVH7 229 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 PDXDC2PQ6P474 469 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 LINC01599Q8WXQ3 324 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 HLA-CQ95604 372 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 IL17RAQ96F46 866 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 LARP6Q9BRS8 491 aaKnown RBP25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 SH3GLB2Q9NR46 395 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 SQORQ9Y6N5 450 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 RALGAPA2Q2PPJ7 1873 aa25.26■■□□□ 1.63
SPTBN4-206ENST00000593932 XIRP2A4UGR9 3374 aa25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 KLRC1P26715 233 aa25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 ZNF746Q6NUN9 644 aaPredicted RBP25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 TMEM192Q8IY95 271 aa25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 TRIM22Q8IYM9 498 aa25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 LENG9Q96B70 501 aa25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 CELF4Q9BZC1 486 aaKnown RBP25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 COL1A2P08123 1366 aa25.25■■□□□ 1.63
SPTBN4-206ENST00000593932 BDP1A6H8Y1 2624 aa25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 NCOR1O75376 2440 aa25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 TTC3P53804 2025 aa25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 IGSF9BQ9UPX0 1349 aa25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 EDIL3O43854 480 aa25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 ATP4AP20648 1035 aa25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 SSRP1Q08945 709 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 ZNF274Q96GC6 653 aaPredicted RBP25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 RC3H2Q9HBD1 1191 aaKnown RBP25.24■■□□□ 1.63
SPTBN4-206ENST00000593932 BRWD1Q9NSI6 2320 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 ADGRA3Q8IWK6 1321 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 KDM3AQ9Y4C1 1321 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 ZBTB42B2RXF5 422 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 NLRP5P59047 1200 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 KRT76Q01546 638 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 ZNF484Q5JVG2 852 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 SMAP1Q8IYB5 467 aaPredicted RBP25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 NME8Q8N427 588 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 MRPL38Q96DV4 380 aaKnown RBP25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 NECAB3Q96P71 396 aaPredicted RBP25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 TCEAL9Q9UHQ7 104 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 PADI3Q9ULW8 664 aa25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 MAFBQ9Y5Q3 323 aaPredicted RBP25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 MYH9P35579 1960 aaKnown RBP25.23■■□□□ 1.63
SPTBN4-206ENST00000593932 H3BNC9 293 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 CPLX1O14810 134 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 STK3Q13188 491 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 GPM6BQ13491 265 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 RTN4RL1Q86UN2 441 aaPredicted RBP25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 CKAP2LQ8IYA6 745 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 FIBCD1Q8N539 461 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 PDRG1Q9NUG6 133 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 PCDHA10Q9Y5I2 948 aa25.22■■□□□ 1.63
SPTBN4-206ENST00000593932 DEXIO95424 95 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 PSAPP07602 524 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 LINC00271P0C7V0 271 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 PAK2Q13177 524 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 KIAA0319LQ8IZA0 1049 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 BBXQ8WY36 941 aaPredicted RBP25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 FTHL17Q9BXU8 183 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 PCDHA4Q9UN74 947 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 WDR81Q562E7 1941 aa25.21■■□□□ 1.63
SPTBN4-206ENST00000593932 MUC3AQ02505 3323 aa25.2■■□□□ 1.63
SPTBN4-206ENST00000593932 EVPLQ92817 2033 aa25.2■■□□□ 1.63
SPTBN4-206ENST00000593932 MSH4O15457 936 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms