RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PCDH10Q9P2E7 1040 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 TRPC6Q9Y210 931 aa22.04■■□□□ 1.12
LSM4-203ENST00000593829 POTEB3A0JP26 581 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 PRPF40AO75400 957 aaKnown RBP22.03■■□□□ 1.12
LSM4-203ENST00000593829 ITGB8P26012 769 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 TXKP42681 527 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 PPFIA1Q13136 1202 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 POTEBQ6S5H4 581 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 BRAPQ7Z569 592 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 CTAGE1Q96RT6 745 aa22.03■■□□□ 1.12
LSM4-203ENST00000593829 NOC4LQ9BVI4 516 aaKnown RBP22.03■■□□□ 1.12
LSM4-203ENST00000593829 NCLP19338 710 aaKnown RBP22.02■■□□□ 1.12
LSM4-203ENST00000593829 MAGEA10P43363 369 aaPredicted RBP22.02■■□□□ 1.12
LSM4-203ENST00000593829 MDM2Q00987 491 aaPredicted RBP22.02■■□□□ 1.12
LSM4-203ENST00000593829 CKAP2LQ8IYA6 745 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 ATP8B4Q8TF62 1192 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 LMBR1Q8WVP7 490 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 BADQ92934 168 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 PPP1R12CQ9BZL4 782 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 TTC12Q9H892 705 aaPredicted RBP22.02■■□□□ 1.12
LSM4-203ENST00000593829 PCDHB6Q9Y5E3 794 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 IGSF9BQ9UPX0 1349 aa22.02■■□□□ 1.12
LSM4-203ENST00000593829 EML1O00423 815 aa22.02■■□□□ 1.11
LSM4-203ENST00000593829 STX6O43752 255 aa22.02■■□□□ 1.11
LSM4-203ENST00000593829 INSRRP14616 1297 aa22.02■■□□□ 1.11
LSM4-203ENST00000593829 PTK7Q13308 1070 aa22.02■■□□□ 1.11
LSM4-203ENST00000593829 GRIK4Q16099 956 aa22.02■■□□□ 1.11
LSM4-203ENST00000593829 CEP290O15078 2479 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 RRN3P2A6NIE6 340 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 BRD1O95696 1058 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 OR52Z1P0C646 297 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 SPIRE1Q08AE8 756 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 BFSP2Q13515 415 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 CSPP1Q1MSJ5 1256 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 NCAPH2Q6IBW4 605 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 FERMT3Q86UX7 667 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 CCDC155Q8N6L0 562 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 ZKSCAN5Q9Y2L8 839 aa22.01■■□□□ 1.11
LSM4-203ENST00000593829 TREHO43280 583 aa22■■□□□ 1.11
LSM4-203ENST00000593829 HBP1O60381 514 aa22■■□□□ 1.11
LSM4-203ENST00000593829 ATP4AP20648 1035 aa22■■□□□ 1.11
LSM4-203ENST00000593829 CYP2C18P33260 490 aa22■■□□□ 1.11
LSM4-203ENST00000593829 ADAM17P78536 824 aa22■■□□□ 1.11
LSM4-203ENST00000593829 MFSD5Q6N075 450 aa22■■□□□ 1.11
LSM4-203ENST00000593829 SERINC5Q86VE9 423 aa22■■□□□ 1.11
LSM4-203ENST00000593829 CAGE1Q8TC20 777 aa22■■□□□ 1.11
LSM4-203ENST00000593829 BBXQ8WY36 941 aaPredicted RBP22■■□□□ 1.11
LSM4-203ENST00000593829 EIF2AK3Q9NZJ5 1116 aaKnown RBP22■■□□□ 1.11
LSM4-203ENST00000593829 MTMR6Q9Y217 621 aa22■■□□□ 1.11
LSM4-203ENST00000593829 PDIA4P13667 645 aaKnown RBP22■■□□□ 1.11
LSM4-203ENST00000593829 EPHA7Q15375 998 aa22■■□□□ 1.11
LSM4-203ENST00000593829 C4orf32Q8N8J7 132 aa22■■□□□ 1.11
LSM4-203ENST00000593829 FAM167AQ96KS9 214 aa22■■□□□ 1.11
LSM4-203ENST00000593829 MAP7D2Q96T17 732 aa22■■□□□ 1.11
LSM4-203ENST00000593829 GDF15Q99988 308 aa22■■□□□ 1.11
LSM4-203ENST00000593829 EIF4ENIF1Q9NRA8 985 aaKnown RBP22■■□□□ 1.11
LSM4-203ENST00000593829 UMODL1Q5DID0 1318 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 PITPNM1O00562 1244 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 IGBP1P78318 339 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 PTGDRQ13258 359 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 UGCGQ16739 394 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 RETREG2Q8NC44 543 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 DHX38Q92620 1227 aaKnown RBP21.99■■□□□ 1.11
LSM4-203ENST00000593829 TMEM63CQ9P1W3 806 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 CCDC39Q9UFE4 941 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 LTBP2Q14767 1821 aa21.99■■□□□ 1.11
LSM4-203ENST00000593829 ZNF862O60290 1169 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 TRMT1LQ7Z2T5 733 aaKnown RBP21.98■■□□□ 1.11
LSM4-203ENST00000593829 TMEM199Q8N511 208 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 BANK1Q8NDB2 785 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 NRBP2Q9NSY0 501 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 TUBE1Q9UJT0 475 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 MBLAC1A4D2B0 266 aaPredicted RBP21.98■■□□□ 1.11
LSM4-203ENST00000593829 LAD1O00515 517 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 OATP04181 439 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 P4HBP07237 508 aaKnown RBP21.98■■□□□ 1.11
LSM4-203ENST00000593829 PSMC5P62195 406 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 PRKCEQ02156 737 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 ZNF484Q5JVG2 852 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 MARCH8Q5T0T0 291 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 CHRDL2Q6WN34 429 aa21.98■■□□□ 1.11
LSM4-203ENST00000593829 COL1A2P08123 1366 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 DKC1O60832 514 aaKnown RBP eCLIP21.97■■□□□ 1.11
LSM4-203ENST00000593829 TECP42680 631 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 QARSP47897 775 aaKnown RBP21.97■■□□□ 1.11
LSM4-203ENST00000593829 CCL23P55773 120 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 FPGSQ05932 587 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 RBL2Q08999 1139 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 RESTQ13127 1097 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 WNT8AQ9H1J5 351 aa21.97■■□□□ 1.11
LSM4-203ENST00000593829 MYH9P35579 1960 aaKnown RBP21.97■■□□□ 1.11
LSM4-203ENST00000593829 BMP8BP34820 402 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 TMEM266Q2M3C6 531 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 TRIM71Q2Q1W2 868 aaKnown RBP21.96■■□□□ 1.11
LSM4-203ENST00000593829 TAF2Q6P1X5 1199 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 TRAPPC12Q8WVT3 735 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 WNT8BQ93098 351 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 UBE2OQ9C0C9 1292 aaKnown RBP21.96■■□□□ 1.11
LSM4-203ENST00000593829 ZSCAN16Q9H4T2 348 aaPredicted RBP21.96■■□□□ 1.11
LSM4-203ENST00000593829 CEP131Q9UPN4 1083 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms